RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
NEAT1-201ENST00000499732 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 SMARCE1Q969G3 411 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 ST7Q9NRC1 585 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 USP40Q9NVE5 1235 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 CEP131Q9UPN4 1083 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 NFE2L3Q9Y4A8 694 aa16.45■□□□□ 0.22
NEAT1-201ENST00000499732 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
NEAT1-201ENST00000499732 GUCY1A2P33402 732 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 TFAP4Q01664 338 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 CXCL9Q07325 125 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 TRIM22Q8IYM9 498 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
NEAT1-201ENST00000499732 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
NEAT1-201ENST00000499732 POTECB2RU33 542 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 CALM1P0DP23 149 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 CALM2P0DP24 149 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 CALM3P0DP25 149 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 GNG11P61952 73 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 HTRA3P83110 453 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 PPP2R3AQ06190 1150 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 TNIP1Q15025 636 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 RSRC2Q7L4I2 434 aaKnown RBP16.43■□□□□ 0.22
NEAT1-201ENST00000499732 DIS3L2Q8IYB7 885 aaKnown RBP16.43■□□□□ 0.22
NEAT1-201ENST00000499732 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 CCDC34Q96HJ3 373 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 MYH8P13535 1937 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
NEAT1-201ENST00000499732 DDNO94850 711 aaPredicted RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 DEXIO95424 95 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 RASA1P20936 1047 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 MMP14P50281 582 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 TOB1P50616 345 aaPredicted RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 RBM5P52756 815 aaKnown RBP eCLIP16.42■□□□□ 0.221e-323■□□□□ 8.3
NEAT1-201ENST00000499732 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 FUT2Q10981 343 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 OGFOD1Q8N543 542 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 RABGGTAQ92696 567 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 NAA15Q9BXJ9 866 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 A0A1B0GTH6 734 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 FOXN1O15353 648 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 POLR2DO15514 142 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 CDK8P49336 464 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 CC2D1AQ6P1N0 951 aaPredicted RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 TCP11L1Q9NUJ3 509 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 SERTAD1Q9UHV2 236 aa16.42■□□□□ 0.22
NEAT1-201ENST00000499732 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
NEAT1-201ENST00000499732 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 FZD9O00144 591 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
NEAT1-201ENST00000499732 PLEKHA8P1O95397 391 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 NR1I3Q14994 352 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 DGKHQ86XP1 1220 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 PDILTQ8N807 584 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 GOLGA1Q92805 767 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 WDR24Q96S15 920 aa16.41■□□□□ 0.22
NEAT1-201ENST00000499732 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
NEAT1-201ENST00000499732 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
NEAT1-201ENST00000499732 ACTN4O43707 911 aaKnown RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 CCDC175P0C221 793 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 ZNF287Q9HBT7 754 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
NEAT1-201ENST00000499732 PICALMQ13492 652 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
NEAT1-201ENST00000499732 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
NEAT1-201ENST00000499732 TUBB2AQ13885 445 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 MTMR14Q8NCE2 650 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 TUBB2BQ9BVA1 445 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms