RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CNGA1P29973 690 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 ZNF543Q08ER8 600 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 SYDE2Q5VT97 1194 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 BTNL9Q6UXG8 535 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.21■■□□□ 1.47
COL9A2-211ENST00000496215 DDX11Q96FC9 970 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 GPCPD1Q9NPB8 672 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 DIS3Q9Y2L1 958 aaKnown RBP24.21■■□□□ 1.47
COL9A2-211ENST00000496215 H0YGN5 161 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 SLC16A2P36021 539 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 ZNF792Q3KQV3 632 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 TTBK2Q6IQ55 1244 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 RALYLQ86SE5 291 aaKnown RBP24.2■■□□□ 1.46
COL9A2-211ENST00000496215 ANKRD35Q8N283 1001 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 MAP4K1Q92918 833 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 AGBL1Q96MI9 1066 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 HTATIP2Q9BUP3 242 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 RANBP17Q9H2T7 1088 aaKnown RBP24.2■■□□□ 1.46
COL9A2-211ENST00000496215 ACAD9Q9H845 621 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 RNF146Q9NTX7 359 aa24.2■■□□□ 1.46
COL9A2-211ENST00000496215 RBM8AQ9Y5S9 174 aaKnown RBP24.2■■□□□ 1.46
COL9A2-211ENST00000496215 SMCHD1A6NHR9 2005 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 MSCO60682 206 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 SNAP25P60880 206 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 TKFCQ3LXA3 575 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 PRAMEF19Q5SWL8 479 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 GPATCH4Q5T3I0 446 aaKnown RBP24.19■■□□□ 1.46
COL9A2-211ENST00000496215 ANKS1AQ92625 1134 aa24.19■■□□□ 1.46
COL9A2-211ENST00000496215 DDX20Q9UHI6 824 aaKnown RBP24.19■■□□□ 1.46
COL9A2-211ENST00000496215 PFASO15067 1338 aa24.18■■□□□ 1.46
COL9A2-211ENST00000496215 CENPBP07199 599 aaPredicted RBP24.18■■□□□ 1.46
COL9A2-211ENST00000496215 ALAS1P13196 640 aa24.18■■□□□ 1.46
COL9A2-211ENST00000496215 IFIT1BQ5T764 474 aaKnown RBP24.18■■□□□ 1.46
COL9A2-211ENST00000496215 CASC1Q6TDU7 716 aa24.18■■□□□ 1.46
COL9A2-211ENST00000496215 DPF3Q92784 378 aa24.18■■□□□ 1.46
COL9A2-211ENST00000496215 CCPG1Q9ULG6 757 aa24.18■■□□□ 1.46
COL9A2-211ENST00000496215 DNAJC25-GNG10A0A024R161 153 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 E7EWF7 191 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 ICAM1P05362 532 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 TAL1P17542 331 aaPredicted RBP24.17■■□□□ 1.46
COL9A2-211ENST00000496215 CYB5R4Q7L1T6 521 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 NECAB2Q7Z6G3 386 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 NCOA7Q8NI08 942 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 TINF2Q9BSI4 451 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 LSG1Q9H089 658 aaKnown RBP24.17■■□□□ 1.46
COL9A2-211ENST00000496215 ANO2Q9NQ90 1003 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 TAF6LQ9Y6J9 622 aa24.17■■□□□ 1.46
COL9A2-211ENST00000496215 LCTP09848 1927 aa24.16■■□□□ 1.46
COL9A2-211ENST00000496215 COL6A1P12109 1028 aa24.16■■□□□ 1.46
COL9A2-211ENST00000496215 FGD4Q96M96 766 aa24.16■■□□□ 1.46
COL9A2-211ENST00000496215 TRERF1Q96PN7 1200 aa24.16■■□□□ 1.46
COL9A2-211ENST00000496215 NRBP1Q9UHY1 535 aa24.16■■□□□ 1.46
COL9A2-211ENST00000496215 LRRC37A2A6NM11 1700 aa24.15■■□□□ 1.46
COL9A2-211ENST00000496215 CDC45O75419 566 aa24.15■■□□□ 1.46
COL9A2-211ENST00000496215 GOLGA8HP0CJ92 632 aa24.15■■□□□ 1.46
COL9A2-211ENST00000496215 ASPRV1Q53RT3 343 aa24.15■■□□□ 1.46
COL9A2-211ENST00000496215 STOX1Q6ZVD7 989 aa24.15■■□□□ 1.46
COL9A2-211ENST00000496215 MSL3Q8N5Y2 521 aaKnown RBP24.15■■□□□ 1.46
COL9A2-211ENST00000496215 A1CFQ9NQ94 594 aaKnown RBP24.15■■□□□ 1.46
COL9A2-211ENST00000496215 MCM3APO60318 1980 aa24.14■■□□□ 1.46
COL9A2-211ENST00000496215 SYNGAP1Q96PV0 1343 aa24.14■■□□□ 1.46
COL9A2-211ENST00000496215 ERICH2A1L162 156 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 SEPT4O43236 478 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 SART3Q15020 963 aaKnown RBP24.14■■□□□ 1.45
COL9A2-211ENST00000496215 SEC23AQ15436 765 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 ANO1Q5XXA6 986 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 ZNF467Q7Z7K2 595 aaPredicted RBP24.14■■□□□ 1.45
COL9A2-211ENST00000496215 C11orf49Q9H6J7 331 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 PNMA2Q9UL42 364 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 CNPY2Q9Y2B0 182 aa24.14■■□□□ 1.45
COL9A2-211ENST00000496215 POTEB2H3BUK9 544 aa24.12■■□□□ 1.45
COL9A2-211ENST00000496215 IFIT3O14879 490 aaKnown RBP24.12■■□□□ 1.45
COL9A2-211ENST00000496215 PARP1P09874 1014 aaKnown RBP24.12■■□□□ 1.45
COL9A2-211ENST00000496215 MUM1L1Q5H9M0 696 aa24.12■■□□□ 1.45
COL9A2-211ENST00000496215 WDR19Q8NEZ3 1342 aa24.11■■□□□ 1.45
COL9A2-211ENST00000496215 MAMDC4Q6UXC1 1216 aa24.11■■□□□ 1.45
COL9A2-211ENST00000496215 MB21D2Q8IYB1 491 aaPredicted RBP24.11■■□□□ 1.45
COL9A2-211ENST00000496215 PCDH10Q9P2E7 1040 aa24.11■■□□□ 1.45
COL9A2-211ENST00000496215 MYH6P13533 1939 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 SLC27A2O14975 620 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 ZNF865P0CJ78 1059 aaPredicted RBP24.1■■□□□ 1.45
COL9A2-211ENST00000496215 WTAPQ15007 396 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 NSMFQ6X4W1 530 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 FAM133AQ8N9E0 248 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 LENG1Q96BZ8 264 aaPredicted RBP24.1■■□□□ 1.45
COL9A2-211ENST00000496215 UBA5Q9GZZ9 404 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 CPVLQ9H3G5 476 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 CYP39A1Q9NYL5 469 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 COLQQ9Y215 455 aaPredicted RBP24.1■■□□□ 1.45
COL9A2-211ENST00000496215 ASTN1O14525 1302 aa24.1■■□□□ 1.45
COL9A2-211ENST00000496215 DHX16O60231 1041 aaKnown RBP24.09■■□□□ 1.45
COL9A2-211ENST00000496215 EVI5O60447 810 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 SNAI1O95863 264 aaPredicted RBP24.09■■□□□ 1.45
COL9A2-211ENST00000496215 AKR1A1P14550 325 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 CNTN2Q02246 1040 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 CDC37Q16543 378 aaPredicted RBP24.09■■□□□ 1.45
COL9A2-211ENST00000496215 TMEM67Q5HYA8 995 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 CREB3L3Q68CJ9 461 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 CHST3Q7LGC8 479 aa24.09■■□□□ 1.45
COL9A2-211ENST00000496215 ZHX1Q9UKY1 873 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms