RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TDO2P48775 406 aa17.01■□□□□ 0.31
VARS-228ENST00000495010 ZNF365Q70YC5 407 aa17.01■□□□□ 0.31
VARS-228ENST00000495010 PBX4Q9BYU1 374 aa17.01■□□□□ 0.31
VARS-228ENST00000495010 UPF3AQ9H1J1 476 aaKnown RBP17.01■□□□□ 0.31
VARS-228ENST00000495010 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
VARS-228ENST00000495010 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
VARS-228ENST00000495010 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
VARS-228ENST00000495010 APPP05067 770 aa17■□□□□ 0.31
VARS-228ENST00000495010 PBX2P40425 430 aa17■□□□□ 0.31
VARS-228ENST00000495010 OAZ1P54368 228 aa17■□□□□ 0.31
VARS-228ENST00000495010 IRX5P78411 483 aaPredicted RBP17■□□□□ 0.31
VARS-228ENST00000495010 RAB30Q15771 203 aa17■□□□□ 0.31
VARS-228ENST00000495010 C16orf59Q7L2K0 433 aa17■□□□□ 0.31
VARS-228ENST00000495010 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
VARS-228ENST00000495010 PRDM12Q9H4Q4 367 aa17■□□□□ 0.31
VARS-228ENST00000495010 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
VARS-228ENST00000495010 LAMA2P24043 3122 aaKnown RBP17■□□□□ 0.31
VARS-228ENST00000495010 TTLL1O95922 423 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 FDX1P10109 184 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 GNAT2P19087 354 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
VARS-228ENST00000495010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS-228ENST00000495010 FAM126BQ8IXS8 530 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 ATXN2LQ8WWM7 1075 aaKnown RBP16.99■□□□□ 0.31
VARS-228ENST00000495010 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
VARS-228ENST00000495010 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
VARS-228ENST00000495010 ASB14A6NK59 587 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 ADCY6O43306 1168 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 SMARCA5O60264 1052 aaPredicted RBP16.98■□□□□ 0.31
VARS-228ENST00000495010 ZEB2O60315 1214 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 PRDM1O75626 825 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 CABYRO75952 493 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 FGBP02675 491 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 BMP3P12645 472 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 IGFBP4P22692 258 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 CYP2C18P33260 490 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 BEX3Q00994 111 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
VARS-228ENST00000495010 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 APPBP2Q92624 585 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 MKL1Q969V6 931 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 MTMR4Q9NYA4 1195 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
VARS-228ENST00000495010 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
VARS-228ENST00000495010 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 CNTN2Q02246 1040 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
VARS-228ENST00000495010 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 KBTBD3Q8NAB2 608 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 HERVK_113Q902F9 699 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 SLC28A3Q9HAS3 691 aa16.97■□□□□ 0.31
VARS-228ENST00000495010 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 GPAA1O43292 621 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 CD4P01730 458 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 ZFYP08048 801 aaPredicted RBP16.96■□□□□ 0.31
VARS-228ENST00000495010 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
VARS-228ENST00000495010 STAT2P52630 851 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 PDE4BQ07343 736 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
VARS-228ENST00000495010 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 CHURC1Q8WUH1 139 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 FGD4Q96M96 766 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 SEZ6LQ9BYH1 1024 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 NACAP1Q9BZK3 213 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
VARS-228ENST00000495010 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
VARS-228ENST00000495010 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
VARS-228ENST00000495010 COL9A1P20849 921 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
VARS-228ENST00000495010 ITGA7Q13683 1181 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
VARS-228ENST00000495010 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 TLK2Q86UE8 772 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 ASB2Q96Q27 587 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 RNF146Q9NTX7 359 aa16.95■□□□□ 0.3
VARS-228ENST00000495010 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
VARS-228ENST00000495010 CTAGE5O15320 804 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
VARS-228ENST00000495010 ALAS1P13196 640 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 SLC1A4P43007 532 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 CCL23P55773 120 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 NKX3-2P78367 333 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 OTOP2Q7RTS6 562 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms