RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PIGSQ96S52 555 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 CYTH3O43739 400 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 CNMDO75829 334 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 STAT3P40763 770 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 OAZ1P54368 228 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 POTEEQ6S8J3 1075 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 GTF3C6Q969F1 213 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 TEX13BQ9BXU2 312 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 SPATC1LQ9H0A9 340 aa16.88■□□□□ 0.29
BRCA1-223ENST00000494123 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 ZNF214Q9UL59 606 aaPredicted RBP16.88■□□□□ 0.29
BRCA1-223ENST00000494123 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 GPR25O00155 361 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 ZBTB5O15062 677 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 CDKL5O76039 1030 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
BRCA1-223ENST00000494123 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 QRICH1Q2TAL8 776 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 PNMA2Q9UL42 364 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
BRCA1-223ENST00000494123 ATP2A1O14983 1001 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 ICAM1P05362 532 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 HSPA1AP0DMV8 641 aaKnown RBP16.86■□□□□ 0.29
BRCA1-223ENST00000494123 HSPA1BP0DMV9 641 aaKnown RBP16.86■□□□□ 0.29
BRCA1-223ENST00000494123 IFNAR1P17181 557 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 SP3Q02447 781 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 KIF22Q14807 665 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 Q3C1V9 767 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 TRIM22Q8IYM9 498 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 AGBL1Q96MI9 1066 aa16.86■□□□□ 0.29
BRCA1-223ENST00000494123 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
BRCA1-223ENST00000494123 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
BRCA1-223ENST00000494123 COPB2P35606 906 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 USH1GQ495M9 461 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 WDR78Q5VTH9 848 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 NCAPG2Q86XI2 1143 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 FBXO11Q86XK2 927 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 CCDC83Q8IWF9 413 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 PHKBQ93100 1093 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 MTMR8Q96EF0 704 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
BRCA1-223ENST00000494123 V9GY48 417 aaPredicted RBP16.85■□□□□ 0.29
BRCA1-223ENST00000494123 ZNF536O15090 1300 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 PCNTO95613 3336 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 hCG_1642624A0A1W2PR95 340 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 FKTNO75072 461 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 SLC25A27O95847 323 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 ALAS1P13196 640 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
BRCA1-223ENST00000494123 FUT2Q10981 343 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 TRAF1Q13077 416 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 NTRK3Q16288 839 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
BRCA1-223ENST00000494123 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 HOMER2Q9NSB8 354 aa16.85■□□□□ 0.29
BRCA1-223ENST00000494123 FOXN1O15353 648 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 PPFIA3O75145 1194 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 ERCC3P19447 782 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 MAPK4P31152 587 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
BRCA1-223ENST00000494123 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
BRCA1-223ENST00000494123 RNF26Q9BY78 433 aaPredicted RBP16.84■□□□□ 0.29
BRCA1-223ENST00000494123 PORCNQ9H237 461 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 MROH8Q9H579 483 aa16.84■□□□□ 0.29
BRCA1-223ENST00000494123 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
BRCA1-223ENST00000494123 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
BRCA1-223ENST00000494123 SNX21Q969T3 373 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 EFCC1Q9HA90 598 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.28
BRCA1-223ENST00000494123 MGAMO43451 1857 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
BRCA1-223ENST00000494123 FCGRTP55899 365 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 HEATR3Q7Z4Q2 680 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 RIPK3Q9Y572 518 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 IVNS1ABPQ9Y6Y0 642 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 ABCB11O95342 1321 aa16.82■□□□□ 0.28
BRCA1-223ENST00000494123 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
BRCA1-223ENST00000494123 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
BRCA1-223ENST00000494123 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
BRCA1-223ENST00000494123 DEXIO95424 95 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms