RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 LAD1O00515 517 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 ENTPD3O75355 529 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 SCG2P13521 617 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 GNA11P29992 359 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 HOXA7P31268 230 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 CLCN1P35523 988 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 CDK8P49336 464 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 FSTL1Q12841 308 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 GRM4Q14833 912 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 ASPRV1Q53RT3 343 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 CT47A1Q5JQC4 288 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 COL13A1Q5TAT6 717 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 RBM43Q6ZSC3 357 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 CCAR1Q8IX12 1150 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 OGFOD1Q8N543 542 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 FAM200AQ8TCP9 573 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 SH3RF3Q8TEJ3 882 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 ZNF384Q8TF68 577 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 USP28Q96RU2 1077 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 PPP1R9BQ96SB3 815 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 NAP1L4Q99733 375 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 SDF4Q9BRK5 362 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 SPZ1Q9BXG8 430 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 IDI2Q9BXS1 227 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 GDPD2Q9HCC8 539 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 FAM217BQ9NTX9 383 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 ANO10Q9NW15 660 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 SEC63Q9UGP8 760 aaKnown RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 DAGLAQ9Y4D2 1042 aa7.29□□□□□ -1.24
SF3A3-208ENST00000489537 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-208ENST00000489537 ZC3H4Q9UPT8 1303 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 ADAMTSL1Q8N6G6 1762 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 SHTN1A0MZ66 631 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 TRIM75PA6NK02 468 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 PARP1P09874 1014 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 CDC27P30260 824 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 NOVP48745 357 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 RHBDL3P58872 404 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 DIXDC1Q155Q3 683 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 FKBP1CQ5VVH2 108 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 ARL6IP4Q66PJ3 421 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 NBPF11Q86T75 865 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 DIS3L2Q8IYB7 885 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 FAM160A2Q8N612 972 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 FSIP1Q8NA03 581 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 SMC1BQ8NDV3 1235 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 CCDC102AQ96A19 550 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 RRP36Q96EU6 259 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 TAF1DQ9H5J8 278 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 USP40Q9NVE5 1235 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 DACT1Q9NYF0 836 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 PI4KBQ9UBF8 816 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 HERC5Q9UII4 1024 aaKnown RBP7.28□□□□□ -1.24
SF3A3-208ENST00000489537 STX8Q9UNK0 236 aa7.28□□□□□ -1.24
SF3A3-208ENST00000489537 FAM237AA0A1B0GTK4 181 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 ESYT2A0FGR8 921 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 GOLGA6L19H0YKK7 550 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 FZD9O00144 591 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 ECE2O60344 883 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 TTLL1O95922 423 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 USP17L8P0C7I0 530 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 RASA1P20936 1047 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 TXLNAP40222 546 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CRKP46108 304 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 NLRP5P59047 1200 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 TNIP1Q15025 636 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 STX1AQ16623 288 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 DLK2Q6UY11 383 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 MAPKAPK5Q8IW41 473 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CEP57L1Q8IYX8 460 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CYP4X1Q8N118 509 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 DAGLBQ8NCG7 672 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 AGBL3Q8NEM8 1001 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PHKBQ93100 1093 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 HOOK2Q96ED9 719 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 USB1Q9BQ65 265 aaKnown RBP7.27□□□□□ -1.25
SF3A3-208ENST00000489537 ZKSCAN3Q9BRR0 538 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 OSBPL5Q9H0X9 879 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-208ENST00000489537 KANSL2Q9H9L4 492 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 C6orf50Q9HD87 102 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PRDM9Q9NQV7 894 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CCDC39Q9UFE4 941 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PNMA2Q9UL42 364 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PCDHA7Q9UN72 937 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 PASKQ96RG2 1323 aa7.27□□□□□ -1.25
SF3A3-208ENST00000489537 CCDC194A0A1B0GVG4 234 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 WTIPA6NIX2 430 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms