RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 USH1GQ495M9 461 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 RILPL1Q5EBL4 403 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 EARS2Q5JPH6 523 aaKnown RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ANO1Q5XXA6 986 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 CCDC174Q6PII3 467 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 GPT2Q8TD30 523 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 LPAR1Q92633 364 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 TNFRSF25Q93038 417 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 KIFC2Q96AC6 838 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 COA7Q96BR5 231 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 KIAA1683Q9H0B3 1180 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ZNF408Q9H9D4 720 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 C6orf50Q9HD87 102 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 RTEL1Q9NZ71 1219 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 PRR12Q9ULL5 1215 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 SNCAIPQ9Y6H5 919 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ZHX2Q9Y6X8 837 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ESYT2A0FGR8 921 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 SMCO2A6NFE2 343 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 SPTLC2O15270 562 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 USP2O75604 605 aaPredicted RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 YEATS4O95619 227 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 GNA11P29992 359 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 MAP3K9P80192 1104 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 SPP2Q13103 211 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 TTC38Q5R3I4 469 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 MAP1SQ66K74 1059 aaPredicted RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 GALNT17Q6IS24 598 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 CAVIN1Q6NZI2 390 aaKnown RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 BTNL9Q6UXG8 535 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 MOB2Q70IA6 237 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 KRT25Q7Z3Z0 450 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 FAM160B2Q86V87 743 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 REXO1Q8N1G1 1221 aaKnown RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 ZNF280CQ8ND82 737 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 KCNG4Q8TDN1 519 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 CHURC1Q8WUH1 139 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 CUL5Q93034 780 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 SLF1Q9BQI6 1058 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 AMNQ9BXJ7 453 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 ZMYND12Q9H0C1 365 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 RPAP3Q9H6T3 665 aaPredicted RBP7.92□□□□□ -1.14
PDAP1-203ENST00000488214 ELP3Q9H9T3 547 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 FBXO28Q9NVF7 368 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 TMOD4Q9NZQ9 345 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 FEM1BQ9UK73 627 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 PCDHA1Q9Y5I3 950 aa7.92□□□□□ -1.14
PDAP1-203ENST00000488214 TRAF5O00463 557 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 FLOT1O75955 427 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 MARCKSP29966 332 aaPredicted RBP7.91□□□□□ -1.14
PDAP1-203ENST00000488214 TOB1P50616 345 aaPredicted RBP7.91□□□□□ -1.14
PDAP1-203ENST00000488214 BACE1P56817 501 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 UBE2SQ16763 222 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 INF2Q27J81 1249 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 JAKMIP3Q5VZ66 844 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 ANKRD13AQ8IZ07 590 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 LINC00301Q8NCQ3 95 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 SYAP1Q96A49 352 aaPredicted RBP7.91□□□□□ -1.14
PDAP1-203ENST00000488214 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 CLMNQ96JQ2 1002 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 PGBD1Q96JS3 809 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 RANBP17Q9H2T7 1088 aaKnown RBP7.91□□□□□ -1.14
PDAP1-203ENST00000488214 NMRK2Q9NPI5 230 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 EMILIN3Q9NT22 766 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 TMEM260Q9NX78 707 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
PDAP1-203ENST00000488214 RCOR1Q9UKL0 485 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 PCDHA6Q9UN73 950 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 CEP131Q9UPN4 1083 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 PCDHB6Q9Y5E3 794 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 PCDHA8Q9Y5H6 950 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 LCTP09848 1927 aa7.91□□□□□ -1.14
PDAP1-203ENST00000488214 M0R2N6 131 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 WNT7AO00755 349 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 PLA2G6O60733 806 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 MCM7P33993 719 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 TRAPPC10P48553 1259 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 SLC39A14Q15043 492 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 NONOQ15233 471 aaKnown RBP eCLIP7.9□□□□□ -1.14
PDAP1-203ENST00000488214 PTPAQ15257 358 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 CCDC73Q6ZRK6 1079 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 ARMC9Q7Z3E5 817 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 LDHDQ86WU2 507 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 FSIP1Q8NA03 581 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 MRPS27Q92552 414 aaKnown RBP7.9□□□□□ -1.14
PDAP1-203ENST00000488214 C12orf42Q96LP6 360 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 RIC8AQ9NPQ8 531 aa7.9□□□□□ -1.14
PDAP1-203ENST00000488214 CTDP1Q9Y5B0 961 aaPredicted RBP7.9□□□□□ -1.14
PDAP1-203ENST00000488214 LRRC37A2A6NM11 1700 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 ABCB11O95342 1321 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms