RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 TRPV1Q8NER1 839 aa27.39■■□□□ 1.98
STRADB-209ENST00000488196 GOLGA8HP0CJ92 632 aa27.38■■□□□ 1.97
STRADB-209ENST00000488196 TAL1P17542 331 aaPredicted RBP27.38■■□□□ 1.97
STRADB-209ENST00000488196 UBE2Q1Q7Z7E8 422 aa27.38■■□□□ 1.97
STRADB-209ENST00000488196 CHST13Q8NET6 341 aa27.38■■□□□ 1.97
STRADB-209ENST00000488196 DDX11Q96FC9 970 aa27.38■■□□□ 1.97
STRADB-209ENST00000488196 ANO2Q9NQ90 1003 aa27.38■■□□□ 1.97
STRADB-209ENST00000488196 SEC23AQ15436 765 aa27.37■■□□□ 1.97
STRADB-209ENST00000488196 PRAMEF19Q5SWL8 479 aa27.37■■□□□ 1.97
STRADB-209ENST00000488196 RANBP17Q9H2T7 1088 aaKnown RBP27.37■■□□□ 1.97
STRADB-209ENST00000488196 FBXO40Q9UH90 709 aa27.37■■□□□ 1.97
STRADB-209ENST00000488196 CDC45O75419 566 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 ALAS1P13196 640 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 CYBAP13498 195 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 CNGA1P29973 690 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 IFIT1BQ5T764 474 aaKnown RBP27.36■■□□□ 1.97
STRADB-209ENST00000488196 LHX8Q68G74 356 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 CHST3Q7LGC8 479 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 RALYLQ86SE5 291 aaKnown RBP27.36■■□□□ 1.97
STRADB-209ENST00000488196 ANKRD35Q8N283 1001 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 NCOA7Q8NI08 942 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 CPVLQ9H3G5 476 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 RNF146Q9NTX7 359 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 PPP4R2Q9NY27 417 aa27.36■■□□□ 1.97
STRADB-209ENST00000488196 DNAJC25-GNG10A0A024R161 153 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.35■■□□□ 1.97
STRADB-209ENST00000488196 DIS3LQ8TF46 1054 aaKnown RBP27.35■■□□□ 1.97
STRADB-209ENST00000488196 TRERF1Q96PN7 1200 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 UBA5Q9GZZ9 404 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 ACAD9Q9H845 621 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 OGDHLQ9ULD0 1010 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 CCPG1Q9ULG6 757 aa27.35■■□□□ 1.97
STRADB-209ENST00000488196 DIS3Q9Y2L1 958 aaKnown RBP27.35■■□□□ 1.97
STRADB-209ENST00000488196 GPATCH4Q5T3I0 446 aaKnown RBP27.34■■□□□ 1.97
STRADB-209ENST00000488196 TINF2Q9BSI4 451 aa27.34■■□□□ 1.97
STRADB-209ENST00000488196 IFIT3O14879 490 aaKnown RBP27.33■■□□□ 1.97
STRADB-209ENST00000488196 SLC27A2O14975 620 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 ICAM1P05362 532 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 CAPN2P17655 700 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 TKFCQ3LXA3 575 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 MUM1L1Q5H9M0 696 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 CASC1Q6TDU7 716 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 PAWRQ96IZ0 340 aaKnown RBP27.33■■□□□ 1.97
STRADB-209ENST00000488196 SENP2Q9HC62 589 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 CEP290O15078 2479 aa27.33■■□□□ 1.97
STRADB-209ENST00000488196 FRMPD3Q5JV73 1810 aa27.32■■□□□ 1.96
STRADB-209ENST00000488196 MCM3APO60318 1980 aa27.32■■□□□ 1.96
STRADB-209ENST00000488196 MNX1P50219 401 aaPredicted RBP27.32■■□□□ 1.96
STRADB-209ENST00000488196 ANTXR2P58335 489 aa27.32■■□□□ 1.96
STRADB-209ENST00000488196 NECTIN1Q15223 517 aa27.32■■□□□ 1.96
STRADB-209ENST00000488196 CREB3L3Q68CJ9 461 aa27.32■■□□□ 1.96
STRADB-209ENST00000488196 MB21D2Q8IYB1 491 aaPredicted RBP27.32■■□□□ 1.96
STRADB-209ENST00000488196 A1CFQ9NQ94 594 aaKnown RBP27.32■■□□□ 1.96
STRADB-209ENST00000488196 DDX20Q9UHI6 824 aaKnown RBP27.32■■□□□ 1.96
STRADB-209ENST00000488196 ERICH6BQ5W0A0 696 aa27.31■■□□□ 1.96
STRADB-209ENST00000488196 PARP1P09874 1014 aaKnown RBP27.3■■□□□ 1.96
STRADB-209ENST00000488196 CNTN2Q02246 1040 aa27.3■■□□□ 1.96
STRADB-209ENST00000488196 COL9A3Q14050 684 aaPredicted RBP27.3■■□□□ 1.96
STRADB-209ENST00000488196 ASPRV1Q53RT3 343 aa27.3■■□□□ 1.96
STRADB-209ENST00000488196 ANO1Q5XXA6 986 aa27.3■■□□□ 1.96
STRADB-209ENST00000488196 ANKLE1Q8NAG6 615 aa27.3■■□□□ 1.96
STRADB-209ENST00000488196 FGD4Q96M96 766 aa27.3■■□□□ 1.96
STRADB-209ENST00000488196 ERICH2A1L162 156 aa27.29■■□□□ 1.96
STRADB-209ENST00000488196 WTAPQ15007 396 aa27.29■■□□□ 1.96
STRADB-209ENST00000488196 STAG2Q8N3U4 1231 aa27.29■■□□□ 1.96
STRADB-209ENST00000488196 POTEB2H3BUK9 544 aa27.28■■□□□ 1.96
STRADB-209ENST00000488196 TMEM67Q5HYA8 995 aa27.28■■□□□ 1.96
STRADB-209ENST00000488196 NECAB2Q7Z6G3 386 aa27.28■■□□□ 1.96
STRADB-209ENST00000488196 ADGRF4Q8IZF3 695 aa27.28■■□□□ 1.96
STRADB-209ENST00000488196 BAZ2BQ9UIF8 2168 aaKnown RBP27.27■■□□□ 1.96
STRADB-209ENST00000488196 SEPT4O43236 478 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 MSCO60682 206 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 SNAI1O95863 264 aaPredicted RBP27.27■■□□□ 1.96
STRADB-209ENST00000488196 SART3Q15020 963 aaKnown RBP27.27■■□□□ 1.96
STRADB-209ENST00000488196 MAMDC4Q6UXC1 1216 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 NSMFQ6X4W1 530 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 FAM133AQ8N9E0 248 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 IGDCC4Q8TDY8 1250 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 DPF3Q92784 378 aa27.27■■□□□ 1.96
STRADB-209ENST00000488196 GPHNQ9NQX3 736 aaPredicted RBP27.27■■□□□ 1.96
STRADB-209ENST00000488196 MYH6P13533 1939 aa27.26■■□□□ 1.95
STRADB-209ENST00000488196 NFIBO00712 420 aa27.26■■□□□ 1.95
STRADB-209ENST00000488196 ZNF467Q7Z7K2 595 aaPredicted RBP27.26■■□□□ 1.95
STRADB-209ENST00000488196 MSL3Q8N5Y2 521 aaKnown RBP27.26■■□□□ 1.95
STRADB-209ENST00000488196 HTATIP2Q9BUP3 242 aa27.26■■□□□ 1.95
STRADB-209ENST00000488196 VAT1LQ9HCJ6 419 aa27.26■■□□□ 1.95
STRADB-209ENST00000488196 CYP39A1Q9NYL5 469 aa27.26■■□□□ 1.95
STRADB-209ENST00000488196 PFASO15067 1338 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 SYNGAP1Q96PV0 1343 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 SOWAHBA6NEL2 793 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 PRC1O43663 620 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 ZNF865P0CJ78 1059 aaPredicted RBP27.25■■□□□ 1.95
STRADB-209ENST00000488196 CDC37Q16543 378 aaPredicted RBP27.25■■□□□ 1.95
STRADB-209ENST00000488196 PRPF38BQ5VTL8 546 aaKnown RBP27.25■■□□□ 1.95
STRADB-209ENST00000488196 NRBP1Q9UHY1 535 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 MAD2L2Q9UI95 211 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 CNPY2Q9Y2B0 182 aa27.25■■□□□ 1.95
STRADB-209ENST00000488196 LCTP09848 1927 aa27.24■■□□□ 1.95
STRADB-209ENST00000488196 WDR19Q8NEZ3 1342 aa27.24■■□□□ 1.95
STRADB-209ENST00000488196 DHX16O60231 1041 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms