RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TMEM63BQ5T3F8 832 aa18.55■□□□□ 0.56
U2AF1-211ENST00000486519 IER5LQ5T953 404 aa18.55■□□□□ 0.56
U2AF1-211ENST00000486519 PTCRAQ6ISU1 281 aaPredicted RBP18.55■□□□□ 0.56
U2AF1-211ENST00000486519 HERC6Q8IVU3 1022 aa18.55■□□□□ 0.56
U2AF1-211ENST00000486519 TMX2Q9Y320 296 aa18.55■□□□□ 0.56
U2AF1-211ENST00000486519 TECTAO75443 2155 aa18.54■□□□□ 0.56
U2AF1-211ENST00000486519 AKR1B1P15121 316 aa18.54■□□□□ 0.56
U2AF1-211ENST00000486519 NKX3-2P78367 333 aa18.54■□□□□ 0.56
U2AF1-211ENST00000486519 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
U2AF1-211ENST00000486519 PPP1R13LQ8WUF5 828 aa18.54■□□□□ 0.56
U2AF1-211ENST00000486519 ZDBF2Q9HCK1 2354 aa18.54■□□□□ 0.56
U2AF1-211ENST00000486519 BAZ2AQ9UIF9 1905 aaKnown RBP18.53■□□□□ 0.56
U2AF1-211ENST00000486519 GRXCR2A6NFK2 248 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 WDR46O15213 610 aaKnown RBP18.53■□□□□ 0.56
U2AF1-211ENST00000486519 ST18O60284 1047 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 TRMT13Q9NUP7 481 aaKnown RBP18.53■□□□□ 0.56
U2AF1-211ENST00000486519 MTUS1Q9ULD2 1270 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 PPP1R9AQ9ULJ8 1098 aa18.53■□□□□ 0.56
U2AF1-211ENST00000486519 KMT2EQ8IZD2 1858 aa18.52■□□□□ 0.56
U2AF1-211ENST00000486519 IDH1O75874 414 aaKnown RBP18.52■□□□□ 0.56
U2AF1-211ENST00000486519 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
U2AF1-211ENST00000486519 ARMCX2Q7L311 632 aa18.52■□□□□ 0.56
U2AF1-211ENST00000486519 SLC9A7Q96T83 725 aa18.52■□□□□ 0.56
U2AF1-211ENST00000486519 RIOK1Q9BRS2 568 aaKnown RBP18.52■□□□□ 0.56
U2AF1-211ENST00000486519 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.56
U2AF1-211ENST00000486519 SUGCTQ9HAC7 445 aa18.52■□□□□ 0.56
U2AF1-211ENST00000486519 TRIP12Q14669 1992 aaPredicted RBP18.51■□□□□ 0.55
U2AF1-211ENST00000486519 PNMA6EA0A0J9YXQ4 647 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 ICA1Q05084 483 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 FAM83BQ5T0W9 1011 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 TMEM179Q6ZVK1 233 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 GNEQ9Y223 722 aaKnown RBP18.51■□□□□ 0.55
U2AF1-211ENST00000486519 ATG2AQ2TAZ0 1938 aa18.51■□□□□ 0.55
U2AF1-211ENST00000486519 ZNF536O15090 1300 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 PLXNA3P51805 1871 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 H3BQ06 376 aaPredicted RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 MTX1Q13505 466 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 SNRNP48Q6IEG0 339 aaKnown RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 ZNF467Q7Z7K2 595 aaPredicted RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 TLK2Q86UE8 772 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 NUP88Q99567 741 aaPredicted RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 ALDH8A1Q9H2A2 487 aaPredicted RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 ABHD16BQ9H3Z7 469 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 FAM86C1Q9NVL1 165 aa18.5■□□□□ 0.55
U2AF1-211ENST00000486519 TLR7Q9NYK1 1049 aaKnown RBP18.5■□□□□ 0.55
U2AF1-211ENST00000486519 LCTP09848 1927 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 DCHS1Q96JQ0 3298 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 ZP2Q05996 745 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 ARHGEF10LQ9HCE6 1279 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
U2AF1-211ENST00000486519 PFKMP08237 780 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 CNTN2Q02246 1040 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 TNFAIP2Q03169 654 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 TCF15Q12870 199 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 FSCN1Q16658 493 aaKnown RBP18.48■□□□□ 0.55
U2AF1-211ENST00000486519 PHOSPHO2Q8TCD6 241 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 MCM9Q9NXL9 1143 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 SPTBN4Q9H254 2564 aa18.48■□□□□ 0.55
U2AF1-211ENST00000486519 EEF2P13639 858 aaKnown RBP18.47■□□□□ 0.55
U2AF1-211ENST00000486519 SMPD1P17405 629 aa18.47■□□□□ 0.55
U2AF1-211ENST00000486519 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
U2AF1-211ENST00000486519 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
U2AF1-211ENST00000486519 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
U2AF1-211ENST00000486519 PDGFCQ9NRA1 345 aa18.47■□□□□ 0.55
U2AF1-211ENST00000486519 LMCD1Q9NZU5 365 aa18.47■□□□□ 0.55
U2AF1-211ENST00000486519 MYO15AQ9UKN7 3530 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 C19orf67A6NJJ6 358 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 DYNC1LI2O43237 492 aaPredicted RBP18.46■□□□□ 0.55
U2AF1-211ENST00000486519 GFRA3O60609 400 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 CABYRO75952 493 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 IRS1P35568 1242 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 DEFB103AP81534 67 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 TCTN1Q2MV58 587 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 NEK9Q8TD19 979 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
U2AF1-211ENST00000486519 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
U2AF1-211ENST00000486519 TNKSO95271 1327 aa18.46■□□□□ 0.55
U2AF1-211ENST00000486519 CYP2D7A0A087X1C5 515 aa18.45■□□□□ 0.54
U2AF1-211ENST00000486519 RAD21O60216 631 aa18.45■□□□□ 0.54
U2AF1-211ENST00000486519 COPB2P35606 906 aa18.45■□□□□ 0.54
U2AF1-211ENST00000486519 MRS2Q9HD23 443 aa18.45■□□□□ 0.54
U2AF1-211ENST00000486519 MUTYHQ9UIF7 546 aa18.45■□□□□ 0.54
U2AF1-211ENST00000486519 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
U2AF1-211ENST00000486519 SCN10AQ9Y5Y9 1956 aa18.44■□□□□ 0.54
U2AF1-211ENST00000486519 KIF28PB7ZC32 967 aa18.44■□□□□ 0.54
U2AF1-211ENST00000486519 IQCF3P0C7M6 154 aa18.44■□□□□ 0.54
U2AF1-211ENST00000486519 ACTN1P12814 892 aa18.44■□□□□ 0.54
U2AF1-211ENST00000486519 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
U2AF1-211ENST00000486519 GPNMBQ14956 572 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms