RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CCDC84Q86UT8 332 aaPredicted RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 PRPF38AQ8NAV1 312 aaKnown RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 PROCA1Q8NCQ7 364 aaPredicted RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 ACER1Q8TDN7 264 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 CLMNQ96JQ2 1002 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 RPAP3Q9H6T3 665 aaPredicted RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 HOXC10Q9NYD6 342 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 HCN4Q9Y3Q4 1203 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 CCL15-CCL14A0A0B4J2E2 113 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 A0A0G2JLL6 359 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 PTPDC1A2A3K4 754 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 IFNAR1P17181 557 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 VCAM1P19320 739 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 JAG1P78504 1218 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 CCL15Q16663 113 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 SYDE2Q5VT97 1194 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 LARP1BQ659C4 914 aaKnown RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 PRRT2Q7Z6L0 340 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 HOMER1Q86YM7 354 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SMCR8Q8TEV9 937 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 GTF3C2Q8WUA4 911 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 PIBF1Q8WXW3 757 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 WNK4Q96J92 1243 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SLF1Q9BQI6 1058 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 UBA5Q9GZZ9 404 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 ORC3Q9UBD5 711 aaPredicted RBP8.03□□□□□ -1.12
UBR4-214ENST00000486515 MAD2L2Q9UI95 211 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 PTPN22Q9Y2R2 807 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 CACNA1GO43497 2377 aa8.03□□□□□ -1.12
UBR4-214ENST00000486515 SSC5DA1L4H1 1573 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 hCG_1984214I3L0E3 225 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 ZBTB5O15062 677 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 PLA2G6O60733 806 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 CD2BP2O95400 341 aaKnown RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 FMNL1O95466 1100 aaPredicted RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 SNHG28P0DPA3 235 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 GJB2P29033 226 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 SLC16A2P36021 539 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 CUL4AQ13619 759 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 COG2Q14746 738 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 SH3D19Q5HYK7 790 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 TMTC3Q6ZXV5 915 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 ZNF713Q8N859 430 aaPredicted RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 CCDC148Q8NFR7 591 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 CUL5Q93034 780 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 ZNF333Q96JL9 665 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 C8orf76Q96K31 380 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 C12orf42Q96LP6 360 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 GUCD1Q96NT3 240 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 ALG1Q9BT22 464 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 SPZ1Q9BXG8 430 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 GLT8D2Q9H1C3 349 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 AGTPBP1Q9UPW5 1226 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 KCNH4Q9UQ05 1017 aa8.02□□□□□ -1.13
UBR4-214ENST00000486515 V9GY48 417 aaPredicted RBP8.02□□□□□ -1.13
UBR4-214ENST00000486515 PNMA6FA0A0J9YX94 578 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 PRPF3O43395 683 aaKnown RBP8.01□□□□□ -1.13
UBR4-214ENST00000486515 PLEKHA8P1O95397 391 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 LARGE1O95461 756 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 ALDH1A1P00352 501 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 CALML3P27482 149 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 CDC27P30260 824 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 NAPAP54920 295 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 NLRP5P59047 1200 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 CCNA1P78396 465 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 NUCB2P80303 420 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 PLS1Q14651 629 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 LRIT3Q3SXY7 679 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 CATSPERGQ6ZRH7 1159 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 HEATR3Q7Z4Q2 680 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 RASAL3Q86YV0 1011 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 ADGRF4Q8IZF3 695 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
UBR4-214ENST00000486515 STAG2Q8N3U4 1231 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 MB21D1Q8N884 522 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 BICD2Q8TD16 824 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 PHKBQ93100 1093 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 PARK7Q99497 189 aaKnown RBP8.01□□□□□ -1.13
UBR4-214ENST00000486515 HTATIP2Q9BUP3 242 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 AMNQ9BXJ7 453 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 EMILIN3Q9NT22 766 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 ATP6V1DQ9Y5K8 247 aa8.01□□□□□ -1.13
UBR4-214ENST00000486515 MYPNQ86TC9 1320 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms