RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 KIF5BP33176 963 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 GCLCP48506 637 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-223ENST00000485796 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 ERVK-9P63128 1117 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 ERVK-24P63145 666 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 CDC37Q16543 378 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-223ENST00000485796 QRICH1Q2TAL8 776 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 HOMER1Q86YM7 354 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 MTMR8Q96EF0 704 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 MOV10L1Q9BXT6 1211 aaKnown RBP14.75□□□□□ -0.05
HDAC7-223ENST00000485796 LIMCH1Q9UPQ0 1083 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
HDAC7-223ENST00000485796 CNTNAP5Q8WYK1 1306 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 RCAN1P53805 252 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 PLS1Q14651 629 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 GPRC5AQ8NFJ5 357 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 ZNF296Q8WUU4 475 aaPredicted RBP14.74□□□□□ -0.05
HDAC7-223ENST00000485796 PHKBQ93100 1093 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 SPZ1Q9BXG8 430 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
HDAC7-223ENST00000485796 EFCC1Q9HA90 598 aa14.74□□□□□ -0.05
HDAC7-223ENST00000485796 RBM28Q9NW13 759 aaKnown RBP14.74□□□□□ -0.05
HDAC7-223ENST00000485796 A0A0G2JMZ2 1700 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 STAT3P40763 770 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 MCM2P49736 904 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 GNAQP50148 359 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 FAM110CQ1W6H9 321 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 SNRNP48Q6IEG0 339 aaKnown RBP14.73□□□□□ -0.05
HDAC7-223ENST00000485796 CCDC83Q8IWF9 413 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
HDAC7-223ENST00000485796 ZSCAN31Q96LW9 406 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-223ENST00000485796 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-223ENST00000485796 COL11A1P12107 1806 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-223ENST00000485796 ZSWIM8A7E2V4 1837 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 JAK2O60674 1132 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 SP3Q02447 781 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 MUM1L1Q5H9M0 696 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 MB21D1Q8N884 522 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 CD99L2Q8TCZ2 262 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 GTF3C2Q8WUA4 911 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-223ENST00000485796 SHISA4Q96DD7 197 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 TMX3Q96JJ7 454 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 MYH6P13533 1939 aa14.72□□□□□ -0.05
HDAC7-223ENST00000485796 ATP2A1O14983 1001 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 ZBTB5O15062 677 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 ICAM1P05362 532 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 ALAS1P13196 640 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 IFNAR1P17181 557 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 ERCC3P19447 782 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 SMARCA1P28370 1054 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 LBX1P52954 281 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 LACTBP83111 547 aaPredicted RBP14.71□□□□□ -0.05
HDAC7-223ENST00000485796 PKN1Q16512 942 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 USH1GQ495M9 461 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 RIOX2Q8IUF8 465 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 TBC1D5Q92609 795 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 COA7Q96BR5 231 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 TRIM47Q96LD4 638 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 SLC26A6Q9BXS9 759 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 CCPG1Q9ULG6 757 aa14.71□□□□□ -0.05
HDAC7-223ENST00000485796 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
HDAC7-223ENST00000485796 PNMA6FA0A0J9YX94 578 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 CCDC196A0A1B0GTZ2 297 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 FKTNO75072 461 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
HDAC7-223ENST00000485796 PPP2R5BQ15173 497 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 TYW1BQ6NUM6 668 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 NSUN7Q8NE18 718 aaKnown RBP14.7□□□□□ -0.06
HDAC7-223ENST00000485796 CLEC4DQ8WXI8 215 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 GPKOWQ92917 476 aaPredicted RBP eCLIP14.7□□□□□ -0.06
HDAC7-223ENST00000485796 SNX21Q969T3 373 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 RRP36Q96EU6 259 aaKnown RBP14.7□□□□□ -0.06
HDAC7-223ENST00000485796 AIFM3Q96NN9 605 aa14.7□□□□□ -0.06
HDAC7-223ENST00000485796 SH2B1Q9NRF2 756 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-223ENST00000485796 NFIBO00712 420 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 CPLX1O14810 134 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 OPLAHO14841 1288 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 ADAMTS3O15072 1205 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 PRPF3O43395 683 aaKnown RBP14.69□□□□□ -0.06
HDAC7-223ENST00000485796 FDX1P10109 184 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 PSMC4P43686 418 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 OAZ1P54368 228 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 WDR78Q5VTH9 848 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 WWC2Q6AWC2 1192 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 FBXO11Q86XK2 927 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 DDX11Q96FC9 970 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
HDAC7-223ENST00000485796 DOCK3Q8IZD9 2030 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 CASP8AP2Q9UKL3 1982 aa14.68□□□□□ -0.06
HDAC7-223ENST00000485796 K7ELQ4 463 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-223ENST00000485796 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms