RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ZSCAN10Q96SZ4 725 aaPredicted RBP13.76□□□□□ -0.21
SKI-202ENST00000478223 LSG1Q9H089 658 aaKnown RBP13.76□□□□□ -0.21
SKI-202ENST00000478223 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
SKI-202ENST00000478223 CTDP1Q9Y5B0 961 aaPredicted RBP13.76□□□□□ -0.21
SKI-202ENST00000478223 GOLGA8HP0CJ92 632 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 CNGA1P29973 690 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 COPB2P35606 906 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 ZNF543Q08ER8 600 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 BMP2KLQ5H9B9 411 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■■□ 25
SKI-202ENST00000478223 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 ANKS1AQ92625 1134 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 KRT23Q9C075 422 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 RNF146Q9NTX7 359 aa13.75□□□□□ -0.21
SKI-202ENST00000478223 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
SKI-202ENST00000478223 PFASO15067 1338 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 E7EWF7 191 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 ALAS1P13196 640 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 SEC23AQ15436 765 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 IQCA1Q86XH1 822 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 DGKHQ86XP1 1220 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 ANKLE1Q8NAG6 615 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 TINF2Q9BSI4 451 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
SKI-202ENST00000478223 DDX20Q9UHI6 824 aaKnown RBP13.74□□□□□ -0.21
SKI-202ENST00000478223 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
SKI-202ENST00000478223 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
SKI-202ENST00000478223 ASTN1O14525 1302 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 FDX1P10109 184 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 ANTXR2P58335 489 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 ANKRD35Q8N283 1001 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
SKI-202ENST00000478223 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
SKI-202ENST00000478223 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
SKI-202ENST00000478223 SLC5A4Q9NY91 659 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
SKI-202ENST00000478223 DIS3Q9Y2L1 958 aaKnown RBP13.73□□□□□ -0.21
SKI-202ENST00000478223 H0YGN5 161 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 SNAI1O95863 264 aaPredicted RBP13.72□□□□□ -0.21
SKI-202ENST00000478223 ICAM1P05362 532 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 ZNF865P0CJ78 1059 aaPredicted RBP13.72□□□□□ -0.21
SKI-202ENST00000478223 COL6A1P12109 1028 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 DPF3Q92784 378 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 DDX11Q96FC9 970 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 UBA5Q9GZZ9 404 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 KAT14Q9H8E8 782 aa13.72□□□□□ -0.21
SKI-202ENST00000478223 RANBP2P49792 3224 aaKnown RBP13.71□□□□□ -0.21
SKI-202ENST00000478223 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 NFIBO00712 420 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 SEPT4O43236 478 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 ADCY6O43306 1168 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 NT5C2P49902 561 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 MB21D2Q8IYB1 491 aaPredicted RBP13.71□□□□□ -0.21
SKI-202ENST00000478223 STAG2Q8N3U4 1231 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 UBAC1Q9BSL1 405 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 C11orf49Q9H6J7 331 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 FBXO40Q9UH90 709 aa13.71□□□□□ -0.21
SKI-202ENST00000478223 SLC27A2O14975 620 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 CAPN2P17655 700 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 SLC35G1Q2M3R5 365 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 TKFCQ3LXA3 575 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 GJC2Q5T442 439 aaPredicted RBP13.7□□□□□ -0.22
SKI-202ENST00000478223 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
SKI-202ENST00000478223 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 KATNBL1Q9H079 304 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
SKI-202ENST00000478223 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
SKI-202ENST00000478223 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
SKI-202ENST00000478223 TRDNQ13061 729 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
SKI-202ENST00000478223 CREB3L3Q68CJ9 461 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 SLC30A10Q6XR72 485 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 ARMCX2Q7L311 632 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
SKI-202ENST00000478223 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 ADGRF4Q8IZF3 695 aa13.69□□□□□ -0.22
SKI-202ENST00000478223 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
SKI-202ENST00000478223 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms