RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZSCAN10Q96SZ4 725 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-221ENST00000477561 KRT23Q9C075 422 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 CPVLQ9H3G5 476 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 DDX20Q9UHI6 824 aaKnown RBP9.72□□□□□ -0.85
HDAC6-221ENST00000477561 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 H0YGN5 161 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 CYP21A2P08686 494 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 FDX1P10109 184 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 OAZ1P54368 228 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 ZNF543Q08ER8 600 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 SYDE2Q5VT97 1194 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 CYB5R4Q7L1T6 521 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 DGKHQ86XP1 1220 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 ENAHQ8N8S7 591 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-221ENST00000477561 ANKLE1Q8NAG6 615 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 PNMA1Q8ND90 353 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 CHST13Q8NET6 341 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 TINF2Q9BSI4 451 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 HTATIP2Q9BUP3 242 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 UBA5Q9GZZ9 404 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 KAT14Q9H8E8 782 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 CNNM2Q9H8M5 875 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 RNF146Q9NTX7 359 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 TNKSO95271 1327 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 PDE4DIPQ5VU43 2346 aa9.71□□□□□ -0.86
HDAC6-221ENST00000477561 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 E7EWF7 191 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 SNHG28P0DPA3 235 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 CAPN2P17655 700 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 CNTN2Q02246 1040 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 TRDNQ13061 729 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 MUM1L1Q5H9M0 696 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 BTNL9Q6UXG8 535 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 MAP4K1Q92918 833 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 UBAC1Q9BSL1 405 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
HDAC6-221ENST00000477561 C11orf49Q9H6J7 331 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 ACAD9Q9H845 621 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 FBXO40Q9UH90 709 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 CCPG1Q9ULG6 757 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 DIS3Q9Y2L1 958 aaKnown RBP9.7□□□□□ -0.86
HDAC6-221ENST00000477561 RBM8AQ9Y5S9 174 aaKnown RBP9.7□□□□□ -0.86
HDAC6-221ENST00000477561 LAMA4Q16363 1823 aa9.7□□□□□ -0.86
HDAC6-221ENST00000477561 DNAJC25-GNG10A0A024R161 153 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 POTEB2H3BUK9 544 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 SEPT4O43236 478 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 EVI5O60447 810 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 ICAM1P05362 532 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 GJC2Q5T442 439 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 IFIT1BQ5T764 474 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 NSMFQ6X4W1 530 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 RALYLQ86SE5 291 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 ANKS1AQ92625 1134 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 LSG1Q9H089 658 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 VAT1LQ9HCJ6 419 aa9.69□□□□□ -0.86
HDAC6-221ENST00000477561 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 ZNFX1Q9P2E3 1918 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 DDX49Q9Y6V7 483 aaKnown RBP9.69□□□□□ -0.86
HDAC6-221ENST00000477561 PFASO15067 1338 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 SOWAHBA6NEL2 793 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 MSCO60682 206 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 SNAI1O95863 264 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 ZNF865P0CJ78 1059 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 NT5C2P49902 561 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 TKFCQ3LXA3 575 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 NCOA7Q8NI08 942 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 LENG1Q96BZ8 264 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 FGD4Q96M96 766 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 SENP6Q9GZR1 1112 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 ANO2Q9NQ90 1003 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 ZHX1Q9UKY1 873 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-221ENST00000477561 CNPY2Q9Y2B0 182 aa9.68□□□□□ -0.86
HDAC6-221ENST00000477561 NFIBO00712 420 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 SLC27A2O14975 620 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 DHX16O60231 1041 aaKnown RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 PGK1P00558 417 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 PARP1P09874 1014 aaKnown RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 COL6A1P12109 1028 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 BAATQ14032 418 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 SEC23AQ15436 765 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 USH1GQ495M9 461 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 GPATCH4Q5T3I0 446 aaKnown RBP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC6-221ENST00000477561 ARMCX2Q7L311 632 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 CCDC144CPQ8IYA2 1237 aa9.67□□□□□ -0.86
HDAC6-221ENST00000477561 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms