RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.24
BRD9-203ENST00000475706 ZNF543Q08ER8 600 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 MAP3K21Q5TCX8 1036 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 BTNL9Q6UXG8 535 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 ANKRD35Q8N283 1001 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 CHST13Q8NET6 341 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
BRD9-203ENST00000475706 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 FBXO40Q9UH90 709 aa13.58□□□□□ -0.24
BRD9-203ENST00000475706 SLC27A2O14975 620 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 GPATCH4Q5T3I0 446 aaKnown RBP13.57□□□□□ -0.24
BRD9-203ENST00000475706 OLFML2BQ68BL8 750 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 MAML3Q96JK9 1138 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 UBA5Q9GZZ9 404 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 ZNF536O15090 1300 aa13.57□□□□□ -0.24
BRD9-203ENST00000475706 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 FARP2O94887 1054 aaPredicted RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 SNHG28P0DPA3 235 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 TAL1P17542 331 aaPredicted RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 WTAPQ15007 396 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 SEC23AQ15436 765 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 ZNF792Q3KQV3 632 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 RANBP17Q9H2T7 1088 aaKnown RBP13.56□□□□□ -0.24
BRD9-203ENST00000475706 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
BRD9-203ENST00000475706 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 TMEM67Q5HYA8 995 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 RNF20Q5VTR2 975 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
BRD9-203ENST00000475706 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
BRD9-203ENST00000475706 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
BRD9-203ENST00000475706 LCTP09848 1927 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 ICAM1P05362 532 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 CYBAP13498 195 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 CAPN2P17655 700 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 ANTXR2P58335 489 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 MUM1L1Q5H9M0 696 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 ANO1Q5XXA6 986 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
BRD9-203ENST00000475706 PRC1O43663 620 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 MCM5P33992 734 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 USH1GQ495M9 461 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 PAWRQ96IZ0 340 aaKnown RBP13.53□□□□□ -0.24
BRD9-203ENST00000475706 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
BRD9-203ENST00000475706 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
BRD9-203ENST00000475706 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 HTTP42858 3142 aa13.53□□□□□ -0.24
BRD9-203ENST00000475706 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 IGHA2P01877 340 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
BRD9-203ENST00000475706 CNTN2Q02246 1040 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
BRD9-203ENST00000475706 LHX8Q68G74 356 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 NFXL1Q6ZNB6 911 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.257e-6■□□□□ 10.8
BRD9-203ENST00000475706 CATIPQ7Z7H3 387 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 DIS3LQ8TF46 1054 aaKnown RBP13.52□□□□□ -0.25
BRD9-203ENST00000475706 DPF3Q92784 378 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
BRD9-203ENST00000475706 PNMA2Q9UL42 364 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
BRD9-203ENST00000475706 PFASO15067 1338 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 SEPT4O43236 478 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 MSCO60682 206 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 GRM4Q14833 912 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 MAD2L2Q9UI95 211 aa13.51□□□□□ -0.25
BRD9-203ENST00000475706 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
BRD9-203ENST00000475706 WDR19Q8NEZ3 1342 aa13.5□□□□□ -0.25
BRD9-203ENST00000475706 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
BRD9-203ENST00000475706 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
BRD9-203ENST00000475706 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
BRD9-203ENST00000475706 NFIBO00712 420 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms