RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 STXBP3O00186 592 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 FIBPO43427 364 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.43
SP140-208ENST00000473711 KRT2P35908 639 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 SNAP25P60880 206 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 CEBPZQ03701 1054 aaKnown RBP12.36□□□□□ -0.43
SP140-208ENST00000473711 NR5A1Q13285 461 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
SP140-208ENST00000473711 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
SP140-208ENST00000473711 SYDE2Q5VT97 1194 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
SP140-208ENST00000473711 BRAPQ7Z569 592 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
SP140-208ENST00000473711 WDR18Q9BV38 432 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 WDR90Q96KV7 1748 aa12.36□□□□□ -0.43
SP140-208ENST00000473711 SCN4AP35499 1836 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 PTMSP20962 102 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 IREB2P48200 963 aaKnown RBP12.35□□□□□ -0.43
SP140-208ENST00000473711 NAPAP54920 295 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 DGKZQ13574 1117 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 MYSM1Q5VVJ2 828 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
SP140-208ENST00000473711 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
SP140-208ENST00000473711 COA7Q96BR5 231 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 KIAA1683Q9H0B3 1180 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 FOXP1Q9H334 677 aaPredicted RBP12.35□□□□□ -0.43
SP140-208ENST00000473711 BRMS1Q9HCU9 246 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
SP140-208ENST00000473711 BAZ2BQ9UIF8 2168 aaKnown RBP12.35□□□□□ -0.43
SP140-208ENST00000473711 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 TRAF5O00463 557 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 ZBTB5O15062 677 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 PPP1R11O60927 126 aaPredicted RBP12.34□□□□□ -0.43
SP140-208ENST00000473711 CALML3P27482 149 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 USP14P54578 494 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 BACE1P56817 501 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 FMR1Q06787 632 aaKnown RBP eCLIP12.34□□□□□ -0.43
SP140-208ENST00000473711 MTMR2Q13614 643 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 VGLL4Q14135 290 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 NPY5RQ15761 445 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
SP140-208ENST00000473711 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
SP140-208ENST00000473711 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
SP140-208ENST00000473711 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 CSADQ9Y600 493 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 SNCAIPQ9Y6H5 919 aa12.34□□□□□ -0.43
SP140-208ENST00000473711 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 TRAK2O60296 914 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
SP140-208ENST00000473711 STAT2P52630 851 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 NOM1Q5C9Z4 860 aaKnown RBP12.33□□□□□ -0.44
SP140-208ENST00000473711 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 LEO1Q8WVC0 666 aaPredicted RBP12.33□□□□□ -0.44
SP140-208ENST00000473711 LPAR1Q92633 364 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
SP140-208ENST00000473711 ELP3Q9H9T3 547 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 MYH6P13533 1939 aa12.33□□□□□ -0.44
SP140-208ENST00000473711 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
SP140-208ENST00000473711 PLA2G6O60733 806 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
SP140-208ENST00000473711 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 GALNT17Q6IS24 598 aa12.32□□□□□ -0.44
SP140-208ENST00000473711 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms