RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SPATA4Q8NEY3 305 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 NHEJ1Q9H9Q4 299 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
NPHP4-207ENST00000470763 CAPN6Q9Y6Q1 641 aa15.36■□□□□ 0.05
NPHP4-207ENST00000470763 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 EPHB4P54760 987 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 DDR1Q08345 913 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 IFT88Q13099 833 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 NFRKBQ6P4R8 1299 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 KLC4Q9NSK0 619 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 PARP4Q9UKK3 1724 aaKnown RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 TRIM21P19474 475 aaKnown RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 CYLC1P35663 651 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 PMS1P54277 932 aaKnown RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 NEDD9Q14511 834 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
NPHP4-207ENST00000470763 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 SNX12Q9UMY4 172 aa15.35■□□□□ 0.05
NPHP4-207ENST00000470763 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CHUKO15111 745 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 ELF1P32519 619 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 MMGT1Q8N4V1 131 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 ZNF473Q8WTR7 871 aaKnown RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CAPN11Q9UMQ6 739 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 ESYT3A0FGR9 886 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 B4DLN1 442 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 TCIRG1Q13488 830 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CEP57Q86XR8 500 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CCDC43Q96MW1 224 aaKnown RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 EPB41L4AQ9HCS5 686 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 PLEKP08567 350 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 KIF5AQ12840 1032 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 WTAPQ15007 396 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 HAUS3Q68CZ6 603 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 PCMTD1Q96MG8 357 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-207ENST00000470763 NAPBQ9H115 298 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 STIM2Q9P246 746 aa15.34■□□□□ 0.05
NPHP4-207ENST00000470763 MYH6P13533 1939 aa15.33■□□□□ 0.05
NPHP4-207ENST00000470763 EPB41P11171 864 aaKnown RBP15.33■□□□□ 0.04
NPHP4-207ENST00000470763 PHKG2P15735 406 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
NPHP4-207ENST00000470763 NLRP2Q9NX02 1062 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 MCM8Q9UJA3 840 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 ZSCAN5CA6NGD5 496 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-207ENST00000470763 NCK2O43639 380 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 MOCS3O95396 460 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 NF2P35240 595 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 PTGDRQ13258 359 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC181Q5TID7 509 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 EPN3Q9H201 632 aa15.33■□□□□ 0.04
NPHP4-207ENST00000470763 TNS1Q9HBL0 1735 aaKnown RBP15.33■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF263O14978 683 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FAM153BP0C7A2 387 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FAM153CQ494X1 144 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF658Q5TYW1 1059 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ALS2CLQ60I27 953 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FAM153AQ9UHL3 310 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ODF2LQ9ULJ1 636 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ATXN2Q99700 1313 aaKnown RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 WNK3Q9BYP7 1800 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF233A6NK53 670 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 RPN1P04843 607 aaKnown RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 PDHBP11177 359 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 PDE6AP16499 860 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 CEP85LQ5SZL2 805 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 EMBQ6PCB8 327 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 IFT81Q8WYA0 676 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 CCT8L2Q96SF2 557 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 CARD10Q9BWT7 1032 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FRMD3A2A2Y4 597 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 E7EVH7 732 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 NR1D1P20393 614 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 GUCY2FP51841 1108 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 C8orf74Q6P047 294 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FAM196AQ6ZSG2 479 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 IFNL3Q8IZI9 196 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FANCBQ8NB91 859 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 STRBPQ96SI9 672 aaKnown RBP15.32■□□□□ 0.04
NPHP4-207ENST00000470763 SLC40A1Q9NP59 571 aa15.32■□□□□ 0.04
NPHP4-207ENST00000470763 NFU1Q9UMS0 254 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms