RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 SP3Q02447 781 aa14.67□□□□□ -0.06
SND1-209ENST00000470723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.67□□□□□ -0.064e-7■■■■■ 43.3
SND1-209ENST00000470723 MAF1Q9H063 256 aa14.67□□□□□ -0.06
SND1-209ENST00000470723 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
SND1-209ENST00000470723 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
SND1-209ENST00000470723 PNMA6FA0A0J9YX94 578 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 ZBTB5O15062 677 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
SND1-209ENST00000470723 PLEKHA8P1O95397 391 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 ICAM1P05362 532 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 RGS19P49795 217 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 CCNA1P78396 465 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 SCRN1Q12765 414 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 IKQ13123 557 aaPredicted RBP14.66□□□□□ -0.06
SND1-209ENST00000470723 TKFCQ3LXA3 575 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 RAB11FIP4Q86YS3 637 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 CCDC144CPQ8IYA2 1237 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 SNX21Q969T3 373 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 MOV10L1Q9BXT6 1211 aaKnown RBP14.66□□□□□ -0.06
SND1-209ENST00000470723 TEX13BQ9BXU2 312 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 SLKQ9H2G2 1235 aaPredicted RBP14.66□□□□□ -0.06
SND1-209ENST00000470723 VAT1LQ9HCJ6 419 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 SH2B1Q9NRF2 756 aaPredicted RBP14.66□□□□□ -0.06
SND1-209ENST00000470723 A0A0G2JMZ2 1700 aa14.66□□□□□ -0.06
SND1-209ENST00000470723 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 COL11A1P12107 1806 aaPredicted RBP14.65□□□□□ -0.06
SND1-209ENST00000470723 PRPF3O43395 683 aaKnown RBP14.65□□□□□ -0.06
SND1-209ENST00000470723 PEX10O60683 326 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 FKTNO75072 461 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
SND1-209ENST00000470723 COPB2P35606 906 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 CCT2P78371 535 aaKnown RBP14.65□□□□□ -0.06
SND1-209ENST00000470723 LACTBP83111 547 aaPredicted RBP14.65□□□□□ -0.06
SND1-209ENST00000470723 TRAF1Q13077 416 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 RGS22Q8NE09 1264 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 MROH8Q9H579 483 aa14.65□□□□□ -0.06
SND1-209ENST00000470723 STRNO43815 780 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 GNRH1P01148 92 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 MAPK4P31152 587 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 CDC37Q16543 378 aaPredicted RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 CMTR1Q8N1G2 835 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 CHST13Q8NET6 341 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 ZNF296Q8WUU4 475 aaPredicted RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 GTF3C6Q969F1 213 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 RRP36Q96EU6 259 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 PIGSQ96S52 555 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 PAGR1Q9BTK6 254 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 RAVER2Q9HCJ3 691 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 RIPK3Q9Y572 518 aa14.64□□□□□ -0.07
SND1-209ENST00000470723 V9GY48 417 aaPredicted RBP14.64□□□□□ -0.07
SND1-209ENST00000470723 PPP1R11O60927 126 aaPredicted RBP14.63□□□□□ -0.07
SND1-209ENST00000470723 LARGE1O95461 756 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 CTDNEP1O95476 244 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 ERCC3P19447 782 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 CTGFP29279 349 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 SNAP25P60880 206 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 ABRAQ8N0Z2 381 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 CPXCR1Q8N123 301 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 LLPHQ9BRT6 129 aaKnown RBP14.63□□□□□ -0.07
SND1-209ENST00000470723 AMNQ9BXJ7 453 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 RNF26Q9BY78 433 aaPredicted RBP14.63□□□□□ -0.07
SND1-209ENST00000470723 PORCNQ9H237 461 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
SND1-209ENST00000470723 CTDP1Q9Y5B0 961 aaPredicted RBP14.63□□□□□ -0.07
SND1-209ENST00000470723 CNTNAP5Q8WYK1 1306 aa14.63□□□□□ -0.07
SND1-209ENST00000470723 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
SND1-209ENST00000470723 CAP1Q01518 475 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 GHRHRQ02643 423 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 STK3Q13188 491 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 PKN1Q16512 942 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 SNRNP48Q6IEG0 339 aaKnown RBP14.62□□□□□ -0.07
SND1-209ENST00000470723 CCDC174Q6PII3 467 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 CPLX2Q6PUV4 134 aaKnown RBP14.62□□□□□ -0.07
SND1-209ENST00000470723 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
SND1-209ENST00000470723 FBXO11Q86XK2 927 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 CCDC82Q8N4S0 544 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 SAMD3Q8N6K7 520 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 CLEC4DQ8WXI8 215 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 USP6NLQ92738 828 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 TMX3Q96JJ7 454 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 FBXO40Q9UH90 709 aa14.62□□□□□ -0.07
SND1-209ENST00000470723 MYH6P13533 1939 aa14.61□□□□□ -0.07
SND1-209ENST00000470723 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
SND1-209ENST00000470723 CPLX1O14810 134 aa14.61□□□□□ -0.07
SND1-209ENST00000470723 CDKL5O76039 1030 aa14.61□□□□□ -0.07
SND1-209ENST00000470723 PTPREP23469 700 aa14.61□□□□□ -0.07
SND1-209ENST00000470723 PSMC4P43686 418 aa14.61□□□□□ -0.07
SND1-209ENST00000470723 CUL4AQ13619 759 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms