RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 KDM4AO75164 1064 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 SLC34A2O95436 690 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 PDHBP11177 359 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
SF3A3-204ENST00000462258 PRAMEF19Q5SWL8 479 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
SF3A3-204ENST00000462258 SMCHD1A6NHR9 2005 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 LTBP2Q14767 1821 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 TRIOBPQ9H2D6 2365 aa11.97□□□□□ -0.49
SF3A3-204ENST00000462258 B4E1Z4 1266 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 CHMLP26374 656 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 SNAP25P60880 206 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 SYDE2Q5VT97 1194 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 IQCA1Q86XH1 822 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 MSL3Q8N5Y2 521 aaKnown RBP11.96□□□□□ -0.49
SF3A3-204ENST00000462258 RUFY2Q8WXA3 655 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 TTC14Q96N46 770 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 RANBP17Q9H2T7 1088 aaKnown RBP11.96□□□□□ -0.49
SF3A3-204ENST00000462258 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
SF3A3-204ENST00000462258 TNKSO95271 1327 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 KBTBD13C9JR72 458 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 RARBP10826 455 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 ALAS1P13196 640 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 AKR1A1P14550 325 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 TAL1P17542 331 aaPredicted RBP11.95□□□□□ -0.5
SF3A3-204ENST00000462258 SLC16A2P36021 539 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 GJC2Q5T442 439 aaPredicted RBP11.95□□□□□ -0.5
SF3A3-204ENST00000462258 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
SF3A3-204ENST00000462258 FGD4Q96M96 766 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 TRERF1Q96PN7 1200 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 KRT23Q9C075 422 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
SF3A3-204ENST00000462258 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
SF3A3-204ENST00000462258 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 DNAH12Q6ZR08 3092 aa11.95□□□□□ -0.5
SF3A3-204ENST00000462258 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 ICAM1P05362 532 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 ZNF865P0CJ78 1059 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 LRRC26Q2I0M4 334 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 PNMA1Q8ND90 353 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 ZSCAN10Q96SZ4 725 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 KAT14Q9H8E8 782 aa11.94□□□□□ -0.5
SF3A3-204ENST00000462258 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 ZMYND8Q9ULU4 1186 aaPredicted RBP11.94□□□□□ -0.5
SF3A3-204ENST00000462258 SGSM2O43147 1006 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 LRRC41Q15345 812 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 MUM1L1Q5H9M0 696 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 ARMCX2Q7L311 632 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 ENAHQ8N8S7 591 aaPredicted RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 UBAC1Q9BSL1 405 aa11.93□□□□□ -0.5
SF3A3-204ENST00000462258 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
SF3A3-204ENST00000462258 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 SYNRGQ9UMZ2 1314 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 PGK1P00558 417 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 CYP21A2P08686 494 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 SYN1P17600 705 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 PTH1RQ03431 593 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 TRDNQ13061 729 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 RNF180Q86T96 592 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 PRO3102Q9H379 93 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 ZSWIM5Q9P217 1185 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
SF3A3-204ENST00000462258 LAMA3Q16787 3333 aa11.92□□□□□ -0.5
SF3A3-204ENST00000462258 ASTN1O14525 1302 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 NFIBO00712 420 aa11.91□□□□□ -0.5
SF3A3-204ENST00000462258 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms