RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 RIPK3Q9Y572 518 aa20.58■□□□□ 0.89
SCARNA2-201ENST00000458748 SGSM2O43147 1006 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 SEPT4O43236 478 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 PGK2P07205 417 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 COL6A1P12109 1028 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 ZSCAN10Q96SZ4 725 aaPredicted RBP20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 TINF2Q9BSI4 451 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 PRR12Q9ULL5 1215 aa20.57■□□□□ 0.88
SCARNA2-201ENST00000458748 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 B4E1Z4 1266 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 GPATCH4Q5T3I0 446 aaKnown RBP20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 C7orf61Q8IZ16 206 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 CHMP4CQ96CF2 233 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 ACAD9Q9H845 621 aa20.56■□□□□ 0.88
SCARNA2-201ENST00000458748 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 BTNL9Q6UXG8 535 aa20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 ZNF467Q7Z7K2 595 aaPredicted RBP20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 ARRDC4Q8NCT1 418 aa20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 ZKSCAN3Q9BRR0 538 aa20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
SCARNA2-201ENST00000458748 PFASO15067 1338 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 DNM1LO00429 736 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 PDHBP11177 359 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 SYDE2Q5VT97 1194 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 MAMDC4Q6UXC1 1216 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 ANKS1AQ92625 1134 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 IL25Q9H293 177 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 ZMYND8Q9ULU4 1186 aaPredicted RBP20.54■□□□□ 0.88
SCARNA2-201ENST00000458748 ZNF536O15090 1300 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 SYNGAP1Q96PV0 1343 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 ERICH2A1L162 156 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 CCDC174Q6PII3 467 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 GPCPD1Q9NPB8 672 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 CCPG1Q9ULG6 757 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 TNKSO95271 1327 aa20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
SCARNA2-201ENST00000458748 ICAM1P05362 532 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 ALAS1P13196 640 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 PTH1RQ03431 593 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 ZNF543Q08ER8 600 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 IFIT1BQ5T764 474 aaKnown RBP20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 RANBP17Q9H2T7 1088 aaKnown RBP20.52■□□□□ 0.88
SCARNA2-201ENST00000458748 CYP21A2P08686 494 aa20.51■□□□□ 0.87
SCARNA2-201ENST00000458748 ASPRV1Q53RT3 343 aa20.51■□□□□ 0.87
SCARNA2-201ENST00000458748 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
SCARNA2-201ENST00000458748 NCOA7Q8NI08 942 aa20.51■□□□□ 0.87
SCARNA2-201ENST00000458748 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
SCARNA2-201ENST00000458748 POTEB2H3BUK9 544 aa20.5■□□□□ 0.87
SCARNA2-201ENST00000458748 ZNF865P0CJ78 1059 aaPredicted RBP20.5■□□□□ 0.87
SCARNA2-201ENST00000458748 SYN1P17600 705 aa20.5■□□□□ 0.87
SCARNA2-201ENST00000458748 SLC16A2P36021 539 aa20.5■□□□□ 0.87
SCARNA2-201ENST00000458748 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
SCARNA2-201ENST00000458748 RANBP2P49792 3224 aaKnown RBP20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 PARP1P09874 1014 aaKnown RBP20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 RARBP10826 455 aa20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 AKR1A1P14550 325 aa20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 SENP6Q9GZR1 1112 aaPredicted RBP20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
SCARNA2-201ENST00000458748 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
SCARNA2-201ENST00000458748 ABHD16BQ9H3Z7 469 aa20.48■□□□□ 0.87
SCARNA2-201ENST00000458748 A1CFQ9NQ94 594 aaKnown RBP20.48■□□□□ 0.87
SCARNA2-201ENST00000458748 WDR19Q8NEZ3 1342 aa20.48■□□□□ 0.87
SCARNA2-201ENST00000458748 MCM3APO60318 1980 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 ASB14A6NK59 587 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 E7EWF7 191 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 IFIT3O14879 490 aaKnown RBP20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 TAL1P17542 331 aaPredicted RBP20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 SNAP25P60880 206 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 LRRC41Q15345 812 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 LRRC26Q2I0M4 334 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 FGD4Q96M96 766 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 GDF15Q99988 308 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 XPNPEP3Q9NQH7 507 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 FAM184BQ9ULE4 1060 aa20.47■□□□□ 0.87
SCARNA2-201ENST00000458748 DNAH12Q6ZR08 3092 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 A0A1W2PPC1 479 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 SOX1O00570 391 aaPredicted RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
SCARNA2-201ENST00000458748 NSMFQ6X4W1 530 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms