RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ITGB8P26012 769 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 GYG1P46976 350 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 MCCD1P59942 119 aaPredicted RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 DHX9Q08211 1270 aaKnown RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 GRB14Q14449 540 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 CWF19L2Q2TBE0 894 aaKnown RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 TRIM60Q495X7 471 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 ARSJQ5FYB0 599 aaPredicted RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 TMEM240Q5SV17 173 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 ZNF385CQ66K41 422 aaPredicted RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 LDHAL6AQ6ZMR3 332 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 TRPV1Q8NER1 839 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 ZNF592Q92610 1267 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 RUNDC1Q96C34 613 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 EDC3Q96F86 508 aaKnown RBP2.67□□□□□ -1.98
NEDD1-204ENST00000457368 RABGAP1Q9Y3P9 1069 aa2.67□□□□□ -1.98
NEDD1-204ENST00000457368 MUC6Q6W4X9 2439 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 A0A1W2PRU2 124 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 KBTBD13C9JR72 458 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 LGR5O75473 907 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ADH1AP07327 375 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 HERVK_113P62684 666 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ERVK-9P63128 1117 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ERVK-24P63145 666 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 NKX3-2P78367 333 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 TLE2Q04725 743 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PPIGQ13427 754 aaKnown RBP eCLIP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 RABL6Q3YEC7 729 aaPredicted RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CAVIN4Q5BKX8 364 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 MFSD5Q6N075 450 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PSRC1Q6PGN9 363 aaPredicted RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 DOCK3Q8IZD9 2030 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ABRAQ8N0Z2 381 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 SHCBP1Q8NEM2 672 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 NECAB3Q96P71 396 aaPredicted RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ARID3AQ99856 593 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 IGFLR1Q9H665 355 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 AS3MTQ9HBK9 375 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 TXNRD2Q9NNW7 524 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 LMCD1Q9NZU5 365 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 JAG2Q9Y219 1238 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ATP11BQ9Y2G3 1177 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 LRRFIP2Q9Y608 721 aaKnown RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 DOCK1Q14185 1865 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 SPTBN5Q9NRC6 3674 aaKnown RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 FRMPD3Q5JV73 1810 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 USP17L5A8MUK1 530 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CNMDO75829 334 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 TIMP1P01033 207 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ALADP13716 330 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CAP2P40123 477 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 BACE1P56817 501 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 SNRPNP63162 240 aaKnown RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CCNA1P78396 465 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 SPP2Q13103 211 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 LRRC41Q15345 812 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CCL14Q16627 93 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CCDC57Q2TAC2 916 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 C16orf59Q7L2K0 433 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ERMP1Q7Z2K6 904 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 ZFPM1Q8IX07 1006 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 C8orf58Q8NAV2 365 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 DNAAF4Q8WXU2 420 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PRRX2Q99811 253 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 SEZ6LQ9BYH1 1024 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PORCNQ9H237 461 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PRDM12Q9H4Q4 367 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 CNNM1Q9NRU3 951 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 FLRT1Q9NZU1 646 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 HERC5Q9UII4 1024 aaKnown RBP2.66□□□□□ -1.98
NEDD1-204ENST00000457368 MSRAQ9UJ68 235 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 PCDHA11Q9Y5I1 949 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 LAMA3Q16787 3333 aa2.66□□□□□ -1.98
NEDD1-204ENST00000457368 TRIM75PA6NK02 468 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 STRNO43815 780 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 ALDH1L1O75891 902 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 PDE8BO95263 885 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 RFC5P40937 340 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 RGS3P49796 1198 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 CDK7P50613 346 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 IRX3P78415 501 aaPredicted RBP2.65□□□□□ -1.98
NEDD1-204ENST00000457368 PKN1Q16512 942 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 EPHA10Q5JZY3 1008 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 BEND3Q5T5X7 828 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 FOXD4L5Q5VV16 416 aaPredicted RBP2.65□□□□□ -1.98
NEDD1-204ENST00000457368 LMBR1LQ6UX01 489 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 BMP8AQ7Z5Y6 402 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 ZNF837Q96EG3 531 aaPredicted RBP2.65□□□□□ -1.98
NEDD1-204ENST00000457368 FBXL18Q96ME1 805 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 OCSTAMPQ9BR26 566 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.65□□□□□ -1.98
NEDD1-204ENST00000457368 MTIF3Q9H2K0 278 aaKnown RBP2.65□□□□□ -1.98
NEDD1-204ENST00000457368 PRM3Q9NNZ6 103 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 TIMMDC1Q9NPL8 285 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 USP40Q9NVE5 1235 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 SPEF2Q9C093 1822 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 BRCA2P51587 3418 aa2.65□□□□□ -1.98
NEDD1-204ENST00000457368 ELP1O95163 1332 aa2.65□□□□□ -1.99
NEDD1-204ENST00000457368 MROH7Q68CQ1 1323 aa2.65□□□□□ -1.99
NEDD1-204ENST00000457368 DDTLA6NHG4 134 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms