RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CCDC181Q5TID7 509 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 TTC19Q6DKK2 380 aaPredicted RBP15.31■□□□□ 0.04
PTPRE-204ENST00000455661 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 LPIN2Q92539 896 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 AGPAT5Q9NUQ2 364 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 hCG_1642624A0A1W2PR95 340 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 PUM3Q15397 648 aaKnown RBP15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CCDC96Q2M329 555 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
PTPRE-204ENST00000455661 SPATA4Q8NEY3 305 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 CCDC42Q96M95 316 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
PTPRE-204ENST00000455661 B4DLN1 442 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 LONP1P36776 959 aaKnown RBP15.3■□□□□ 0.04
PTPRE-204ENST00000455661 PPARAQ07869 468 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 TBC1D8BQ0IIM8 1120 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 SEC23AQ15436 765 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 LCORLQ8N3X6 602 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 TNFRSF25Q93038 417 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 CABS1Q96KC9 395 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 DMGDHQ9UI17 866 aaKnown RBP15.3■□□□□ 0.04
PTPRE-204ENST00000455661 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
PTPRE-204ENST00000455661 CALM1P0DP23 149 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CALM2P0DP24 149 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CALM3P0DP25 149 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 TCP1P17987 556 aaKnown RBP15.29■□□□□ 0.04
PTPRE-204ENST00000455661 MCM7P33993 719 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CTSWP56202 376 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CDK17Q00537 523 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 KCNV1Q6PIU1 500 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 HDAC7Q8WUI4 952 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CAVIN3Q969G5 261 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 TUBGCP2Q9BSJ2 902 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 CXorf56Q9H5V9 222 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 STIM2Q9P246 746 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 LRWD1Q9UFC0 647 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
PTPRE-204ENST00000455661 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 MATR3P43243 847 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPRE-204ENST00000455661 APBA1Q02410 837 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 KCNB1Q14721 858 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
PTPRE-204ENST00000455661 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
PTPRE-204ENST00000455661 PIK3AP1Q6ZUJ8 805 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 TEX2Q8IWB9 1127 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 TTYH3Q9C0H2 523 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 FER1L4A9Z1Z3 1794 aa15.29■□□□□ 0.04
PTPRE-204ENST00000455661 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
PTPRE-204ENST00000455661 SLC5A1P13866 664 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 ATP6V1AP38606 617 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 SLC7A5Q01650 507 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 FUT2Q10981 343 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 NNTQ13423 1086 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 TTMPQ5BVD1 217 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 IFIT1BQ5T764 474 aaKnown RBP15.28■□□□□ 0.04
PTPRE-204ENST00000455661 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 RASSF8Q8NHQ8 419 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 ARL8AQ96BM9 186 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 FSBPO95073 299 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 TNFRSF8P28908 595 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 PMS1P54277 932 aaKnown RBP15.28■□□□□ 0.04
PTPRE-204ENST00000455661 NLRP5P59047 1200 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 SEMA3FQ13275 785 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 PDCLQ13371 301 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 IQCDQ96DY2 449 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 OSBPL9Q96SU4 736 aa15.28■□□□□ 0.04
PTPRE-204ENST00000455661 ZSCAN10Q96SZ4 725 aaPredicted RBP15.28■□□□□ 0.04
PTPRE-204ENST00000455661 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 MYL1P05976 194 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 IL17AQ16552 155 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.04
PTPRE-204ENST00000455661 C8orf74Q6P047 294 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 TSEN2Q8NCE0 465 aaKnown RBP15.27■□□□□ 0.04
PTPRE-204ENST00000455661 IFIH1Q9BYX4 1025 aaKnown RBP15.27■□□□□ 0.04
PTPRE-204ENST00000455661 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 MROH5Q6ZUA9 1318 aa15.27■□□□□ 0.04
PTPRE-204ENST00000455661 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 BICDL2A1A5D9 508 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 ZEB2O60315 1214 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 RASGRF1Q13972 1273 aa15.27■□□□□ 0.03
PTPRE-204ENST00000455661 FIGNQ5HY92 759 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms