RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 VPS33BQ9H267 617 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 ST7Q9NRC1 585 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 TMEM260Q9NX78 707 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 TMOD3Q9NYL9 352 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF232Q9UNY5 417 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 ERVV-1B6SEH8 477 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RTCAO00442 366 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 GLRX3O76003 335 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CIAO1O76071 339 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RASGRP1O95267 797 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 NEK2P51955 445 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 SHROOM1Q2M3G4 852 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ZC3H12BQ5HYM0 836 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 FAM117BQ6P1L5 589 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CCDC129Q6ZRS4 1044 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 C16orf71Q8IYS4 520 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 LILRB1Q8NHL6 650 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 OTUD7AQ8TE49 926 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CDH19Q9H159 772 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CSRNP2Q9H175 543 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 N6AMT1Q9Y5N5 214 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RGPD3A6NKT7 1758 aaPredicted RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 MAP3K13O43283 966 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RASA4O43374 803 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 NFKB2Q00653 900 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ROR1Q01973 937 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ATP13A4Q4VNC1 1196 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 C1orf228Q6PIY5 440 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 CLEC17AQ6ZS10 378 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 STAG2Q8N3U4 1231 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ZBTB9Q96C00 473 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 MTMR8Q96EF0 704 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ZMAT2Q96NC0 199 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 ZCCHC17Q9NP64 241 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 PLCB1Q9NQ66 1216 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 GTF2IRD1Q9UHL9 959 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 TSR3Q9UJK0 312 aaKnown RBP8.89□□□□□ -0.99
BRCC3-208ENST00000453705 EXOC6BQ9Y2D4 811 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 KIAA1551Q9HCM1 1747 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 RTL9Q8NET4 1388 aa8.89□□□□□ -0.99
BRCC3-208ENST00000453705 TRIM64A6NGJ6 449 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 TRIM64BA6NI03 449 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 RASA4BC9J798 803 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 IDEP14735 1019 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 CHMLP26374 656 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 FKBP4Q02790 459 aaKnown RBP eCLIP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 LMNB2Q03252 620 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 PIGBQ92521 554 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 N4BP2L2Q92802 583 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 GPRASP2Q96D09 838 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 ALG13Q9NP73 1137 aaKnown RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 FBXL5Q9UKA1 691 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 TRPC5Q9UL62 973 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 CEP83Q9Y592 693 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 LAMA4Q16363 1823 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 HIP1O00291 1037 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 AKR1B10O60218 316 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 ASMTLO95671 621 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 MYCLP1P12525 358 aaPredicted RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 PSMA3P25788 255 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 GTF2A2P52657 109 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 OTOP3Q7RTS5 596 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 BICC1Q9H694 974 aaKnown RBP8.88□□□□□ -0.99
BRCC3-208ENST00000453705 ZNF609O15014 1411 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 AKAP11Q9UKA4 1901 aa8.88□□□□□ -0.99
BRCC3-208ENST00000453705 ZBBXA8MT70 800 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 SURF6O75683 361 aaKnown RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 IGHA2P01877 340 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 ANXA1P04083 346 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 FOXO4P98177 505 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 C16orf86Q6ZW13 317 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 ATP6V1E2Q96A05 226 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 CCDC87Q9NVE4 849 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 MAP3K15Q6ZN16 1313 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 IL6STP40189 918 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 MCM2P49736 904 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 BIRC3Q13489 604 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 PIN1Q13526 163 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 DSC3Q14574 896 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 CWF19L2Q2TBE0 894 aaKnown RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 UTP14CQ5TAP6 766 aaKnown RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 MEI1Q5TIA1 1274 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 MYD88Q99836 296 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 HAUS7Q99871 368 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 YIPF4Q9BSR8 244 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 PLEKHA5Q9HAU0 1116 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 ECHDC1Q9NTX5 307 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms