RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 BTN2A1Q7KYR7 527 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SAMD7Q7Z3H4 446 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZNF804AQ7Z570 1209 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TTC39CQ8N584 583 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TRIML2Q8N7C3 387 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TEKT4Q8WW24 435 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ARHGAP45Q92619 1136 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 GCC1Q96CN9 775 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KIF1BPQ96EK5 621 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SPATA17Q96L03 361 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SRPK1Q96SB4 655 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 JPH2Q9BR39 696 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ST7Q9NRC1 585 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PDRG1Q9NUG6 133 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PIH1D1Q9NWS0 290 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 CHIC2Q9UKJ5 165 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 RIMKLBQ9ULI2 386 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 AKR1B15C9JRZ8 316 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 UBAP1LF5GYI3 381 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 NDUFAB1O14561 156 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 ATP8B1O43520 1251 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 PPP1R12BO60237 982 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 TOM1O60784 492 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 KCNJ13O60928 360 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 CLASP2O75122 1294 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 MYL3P08590 195 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 KRT10P13645 584 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 TMOD1P28289 359 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 SERINC3Q13530 473 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 PROSER3Q2NL68 480 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 TMEM95Q3KNT9 176 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 OSTM1Q86WC4 334 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 ERC1Q8IUD2 1116 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 MFN1Q8IWA4 741 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 CKAP2LQ8IYA6 745 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 IQUBQ8NA54 791 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 MGARPQ8TDB4 240 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 PGBD4Q96DM1 585 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 GPR101Q96P66 508 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 MRPL46Q9H2W6 279 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 ADGRL2O95490 1459 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 FAM196BA6NMK8 535 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 CDC45O75419 566 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 STAMBPO95630 424 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 HOXB1P14653 301 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 HSPA1LP34931 641 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 HSPA2P54652 639 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 INHBCP55103 352 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 CORO7P57737 925 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 PPIDQ08752 370 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 NMIQ13287 307 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 SP140Q13342 867 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 IMMTQ16891 758 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 TNNI3KQ59H18 835 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 MSANTD4Q8NCY6 345 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 FAM200AQ8TCP9 573 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 RBM41Q96IZ5 413 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 PDLIM2Q96JY6 352 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 RBM14Q96PK6 669 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 FNBP1Q96RU3 617 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 UQCC2Q9BRT2 126 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 UTP14AQ9BVJ6 771 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 SEMA4AQ9H3S1 761 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 TTLL3Q9Y4R7 772 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 EMILIN1Q9Y6C2 1016 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 KIAA1107Q9UPP5 1409 aa5.55□□□□□ -1.52
EPHA3-202ENST00000452448 CDK13Q14004 1512 aaKnown RBP5.55□□□□□ -1.52
EPHA3-202ENST00000452448 SORBS3O60504 671 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SNX2O60749 519 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 IVLP07476 585 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 DESP17661 470 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 PLA2G4AP47712 749 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CLNS1AP54105 237 aaKnown RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 INAQ16352 499 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CRY1Q16526 586 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 BBS9Q3SYG4 887 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CATSPER4Q7RTX7 472 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 RAB11FIP4Q86YS3 637 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 GALNT6Q8NCL4 622 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 EPS8L3Q8TE67 593 aaKnown RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CUL5Q93034 780 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NAF1Q96HR8 494 aaKnown RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SETDB2Q96T68 719 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 VCPKMTQ9H867 229 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 LUC7LQ9NQ29 371 aaKnown RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 DKK3Q9UBP4 350 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CFDP1Q9UEE9 299 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 MYO6Q9UM54 1294 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CFAP74Q9C0B2 1584 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NUTM2BA6NNL0 878 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 GOLGA8AA7E2F4 631 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms