RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 NHEJ1Q9H9Q4 299 aaPredicted RBP19.17■□□□□ 0.66
SCUBE2-202ENST00000450649 H7C1D1 291 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 PRCPP42785 496 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 CYP27A1Q02318 531 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 ZNF507Q8TCN5 953 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 AGPAT5Q9NUQ2 364 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 TRIM49BA6NDI0 452 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 CLGNO14967 610 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 RCAN1P53805 252 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 EMBQ6PCB8 327 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 SPATA5Q8NB90 893 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 SPATA4Q8NEY3 305 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 STAG1Q8WVM7 1258 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 RUBCNQ92622 972 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 POLD4Q9HCU8 107 aa19.16■□□□□ 0.66
SCUBE2-202ENST00000450649 TIAM2Q8IVF5 1701 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 SHANK3Q9BYB0 1731 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 GTPBP6O43824 516 aaPredicted RBP19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 PDXDC2PQ6P474 469 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 EP400NLQ6ZTU2 488 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 TMTC2Q8N394 836 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 MAGEB6Q8N7X4 407 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 PDE8AO60658 829 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 NNTQ13423 1086 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 ZKSCAN4Q969J2 545 aaPredicted RBP19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 ZIM3Q96PE6 472 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 ASAP1Q9ULH1 1129 aa19.15■□□□□ 0.66
SCUBE2-202ENST00000450649 KRT2P35908 639 aa19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 NAP1L1P55209 391 aaKnown RBP19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 KIF5AQ12840 1032 aa19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 FKBP15Q5T1M5 1219 aa19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 ARMT1Q9H993 441 aa19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 ZNHIT6Q9NWK9 470 aaKnown RBP19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 TRMT112Q9UI30 125 aaKnown RBP19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 MROH5Q6ZUA9 1318 aa19.14■□□□□ 0.66
SCUBE2-202ENST00000450649 CHUKO15111 745 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 BMP15O95972 392 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 KRT14P02533 472 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 RPN1P04843 607 aaKnown RBP19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 LSP1P33241 339 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 ITIH3Q06033 890 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 NAA35Q5VZE5 725 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 MICALCLQ6ZW33 695 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 ZNF572Q7Z3I7 529 aaPredicted RBP19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 GIMAP7Q8NHV1 300 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 RNPC3Q96LT9 517 aaKnown RBP19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 GNAT2P19087 354 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 PTGDRQ13258 359 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 CCDC170Q8IYT3 715 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 CAVIN3Q969G5 261 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 STIM2Q9P246 746 aa19.14■□□□□ 0.65
SCUBE2-202ENST00000450649 MYCNP04198 464 aaPredicted RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 RDXP35241 583 aaKnown RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 YTHDF3Q7Z739 585 aaKnown RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 ZNF654Q8IZM8 581 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 EPN3Q9H201 632 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 RMND1Q9NWS8 449 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 PDS5AQ29RF7 1337 aaKnown RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 ERICH2A1L162 156 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 PRDM1O75626 825 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 XBP1P17861 261 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 TRIM21P19474 475 aaKnown RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 VAV2P52735 878 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 PMS1P54277 932 aaKnown RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 GUCY1A3Q02108 690 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 RNF187Q5TA31 235 aaPredicted RBP19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 HAUS3Q68CZ6 603 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 PIGBQ92521 554 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 PAGR1Q9BTK6 254 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 SMARCAL1Q9NZC9 954 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 LRWD1Q9UFC0 647 aa19.13■□□□□ 0.65
SCUBE2-202ENST00000450649 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 RASGRF1Q13972 1273 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 KDM7AQ6ZMT4 941 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 TRIM58Q8NG06 486 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 TACO1Q9BSH4 297 aaKnown RBP19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 PHF20Q9BVI0 1012 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 TTYH3Q9C0H2 523 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 PNPLA7Q6ZV29 1317 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 TOGARAM1Q9Y4F4 1720 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 B4DLN1 442 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 MYH3P11055 1940 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 SLC5A1P13866 664 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 EEF1GP26641 437 aaKnown RBP19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 ZNF473Q8WTR7 871 aaKnown RBP19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 RNF26Q9BY78 433 aaPredicted RBP19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 KLC4Q9NSK0 619 aa19.12■□□□□ 0.65
SCUBE2-202ENST00000450649 C21orf2O43822 256 aa19.11■□□□□ 0.65
SCUBE2-202ENST00000450649 TDO2P48775 406 aa19.11■□□□□ 0.65
SCUBE2-202ENST00000450649 KLK7P49862 253 aa19.11■□□□□ 0.65
SCUBE2-202ENST00000450649 DNM2P50570 870 aa19.11■□□□□ 0.65
SCUBE2-202ENST00000450649 ATP2C1P98194 919 aaPredicted RBP19.11■□□□□ 0.65
SCUBE2-202ENST00000450649 NEDD9Q14511 834 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms