RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 CFAP58Q5T655 872 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
LINC00342-202ENST00000448494 CEP128Q6ZU80 1094 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF365Q70YC5 407 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 CCDC65Q8IXS2 484 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 SEC62Q99442 399 aaKnown RBP11.88□□□□□ -0.51
LINC00342-202ENST00000448494 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 PCK1P35558 622 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 ITIH4Q14624 930 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 PI16Q6UXB8 463 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
LINC00342-202ENST00000448494 PPFIBP1Q86W92 1011 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 MREGQ8N565 214 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 AZIN2Q96A70 460 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
LINC00342-202ENST00000448494 CPSF1Q10570 1443 aaKnown RBP11.87□□□□□ -0.51
LINC00342-202ENST00000448494 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 KRT14P02533 472 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 TMTC1Q8IUR5 882 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 CXorf38Q8TB03 319 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 BHMTQ93088 406 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
LINC00342-202ENST00000448494 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 CDC42BPGQ6DT37 1551 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 CRYBG1Q9Y4K1 1723 aa11.87□□□□□ -0.51
LINC00342-202ENST00000448494 ACADSP16219 412 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 IRGCQ6NXR0 463 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF572Q7Z3I7 529 aaPredicted RBP11.86□□□□□ -0.51
LINC00342-202ENST00000448494 EXOC3L1Q86VI1 746 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF18P17022 549 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 XBP1P17861 261 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 GSTT1P30711 240 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 STIP1P31948 543 aaKnown RBP11.86□□□□□ -0.51
LINC00342-202ENST00000448494 PSMC1P62191 440 aaKnown RBP11.86□□□□□ -0.51
LINC00342-202ENST00000448494 ATP11AP98196 1134 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 NR1I3Q14994 352 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 KCNG4Q8TDN1 519 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 PTPRN2Q92932 1015 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 LLPHQ9BRT6 129 aaKnown RBP11.86□□□□□ -0.51
LINC00342-202ENST00000448494 HELLSQ9NRZ9 838 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
LINC00342-202ENST00000448494 ZFYVE9O95405 1425 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 A1BGP04217 495 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 CNGA4Q8IV77 575 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 RHBDL2Q9NX52 303 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 ORC4O43929 436 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 MFAP3LO75121 409 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 RFC5P40937 340 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 ALDH5A1P51649 535 aaPredicted RBP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 USP46P62068 366 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF554Q86TJ5 538 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 SAPCD2Q86UD0 394 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 NME8Q8N427 588 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 RMND1Q9NWS8 449 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 CROTQ9UKG9 612 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
LINC00342-202ENST00000448494 ANO9A1A5B4 782 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 JAK2O60674 1132 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 HIP1RO75146 1068 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 GNAI2P04899 355 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 VDRP11473 427 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 GNAZP19086 355 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 DRD4P21917 467 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 GBP1P32455 592 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 HOXD12P35452 270 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 PTH1RQ03431 593 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 CREB3L3Q68CJ9 461 aa11.84□□□□□ -0.51
LINC00342-202ENST00000448494 RUFY4Q6ZNE9 571 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms