RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 LTN1O94822 1766 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-210ENST00000444502 ZBED4O75132 1171 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 OAS2P29728 719 aaKnown RBP11.83□□□□□ -0.52
TOP3B-210ENST00000444502 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 RNF181Q9P0P0 153 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 BAZ2BQ9UIF8 2168 aaKnown RBP11.83□□□□□ -0.52
TOP3B-210ENST00000444502 GH2P01242 217 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 HARSP12081 509 aaKnown RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CALRP27797 417 aaKnown RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 MAP2K2P36507 400 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CDK8P49336 464 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 MCM6Q14566 821 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CENPHQ9H3R5 247 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 SPAG1Q07617 926 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 PAF1Q8N7H5 531 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 PSTPIP2Q9H939 334 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 DCP1AQ9NPI6 582 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 SPTLC3Q9NUV7 552 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 GEMIN8Q9NWZ8 242 aaKnown RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 PI4KBQ9UBF8 816 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CCDC175P0C221 793 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 IQCB1Q15051 598 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 COA7Q96BR5 231 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 SAMSN1Q9NSI8 373 aaKnown RBP11.82□□□□□ -0.52
TOP3B-210ENST00000444502 MAN1B1Q9UKM7 699 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 ARID5AQ03989 594 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
TOP3B-210ENST00000444502 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 FAM13AO94988 1023 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 PDE4DQ08499 809 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 VPS18Q9P253 973 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
TOP3B-210ENST00000444502 SPA17Q15506 151 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 PLA2G4DQ86XP0 818 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.526e-9■■□□□ 11.7
TOP3B-210ENST00000444502 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 DDAH1O94760 285 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 SEC31AO94979 1220 aaKnown RBP11.81□□□□□ -0.52
TOP3B-210ENST00000444502 FGFR1OPO95684 399 aaKnown RBP11.81□□□□□ -0.52
TOP3B-210ENST00000444502 CALCRLQ16602 461 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 PRR16Q569H4 304 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 SPECC1LQ69YQ0 1117 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 USP49Q70CQ1 688 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 LUC7LQ9NQ29 371 aaKnown RBP11.81□□□□□ -0.52
TOP3B-210ENST00000444502 GUCA1BQ9UMX6 200 aa11.81□□□□□ -0.52
TOP3B-210ENST00000444502 TTLL1O95922 423 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 PTPREP23469 700 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 CYP2C19P33261 490 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 SLC20A2Q08357 652 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 PAK1Q13153 545 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 PRAMEF18Q5VWM3 479 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 FBXO11Q86XK2 927 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 CLEC10AQ8IUN9 316 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 DHX40Q8IX18 779 aaKnown RBP11.8□□□□□ -0.52
TOP3B-210ENST00000444502 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 DPEP1P16444 411 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 PIGSQ96S52 555 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 BCCIPQ9P287 314 aaKnown RBP eCLIP11.8□□□□□ -0.52
TOP3B-210ENST00000444502 CEP83Q9Y592 693 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
TOP3B-210ENST00000444502 TECP42680 631 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 GRIN1Q05586 938 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 STXBP4Q6ZWJ1 553 aa11.8□□□□□ -0.52
TOP3B-210ENST00000444502 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
TOP3B-210ENST00000444502 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 ENGASEQ8NFI3 743 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 NALCNQ8IZF0 1738 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 FGFR2P21802 821 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms