RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 INF2Q27J81 1249 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 KLHL10Q6JEL2 608 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 SMYD4Q8IYR2 804 aaPredicted RBP18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 QSER1Q2KHR3 1735 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 USP17L2Q6R6M4 530 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 DTHD1Q6ZMT9 781 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 FCHSD1Q86WN1 690 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 CCDC12Q8WUD4 166 aaPredicted RBP18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 ANKRD65E5RJM6 399 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 LAD1O00515 517 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 TUBB4AP04350 444 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 GOLGA8FQ08AF8 430 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 GOLGA8DPQ0D2H9 430 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 NRXN2Q9P2S2 1712 aa18.34■□□□□ 0.53
PIKFYVE-206ENST00000443896 GABPAQ06546 454 aa18.33■□□□□ 0.53
PIKFYVE-206ENST00000443896 RASSF4Q9H2L5 321 aa18.33■□□□□ 0.53
PIKFYVE-206ENST00000443896 DISC1Q9NRI5 854 aa18.33■□□□□ 0.53
PIKFYVE-206ENST00000443896 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 SRGNP10124 158 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 PRPHP41219 470 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 STX17P56962 302 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 NAPAP54920 295 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
PIKFYVE-206ENST00000443896 ARHGAP6O43182 974 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 CDC25AP30304 524 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 KARSQ15046 597 aaKnown RBP18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 CERS5Q8N5B7 392 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 SEC31AO94979 1220 aaKnown RBP18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 STAT6P42226 847 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 KRT25Q7Z3Z0 450 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
PIKFYVE-206ENST00000443896 CCSER1Q9C0I3 900 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 RPN1P04843 607 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 NPR1P16066 1061 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 GNA11P29992 359 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 NAALADL2Q58DX5 795 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 ZNF658Q5TYW1 1059 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 CTAGE1Q96RT6 745 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 BAG1Q99933 345 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 ZC3H12CQ9C0D7 883 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 CTNND2Q9UQB3 1225 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 STX10O60499 249 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 DRC1Q96MC2 740 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 RWDD2AQ9UIY3 292 aa18.31■□□□□ 0.52
PIKFYVE-206ENST00000443896 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 PDHBP11177 359 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 PICALMQ13492 652 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 RRAGBQ5VZM2 374 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 PBX1P40424 430 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 NONOQ15233 471 aaKnown RBP eCLIP18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 PIGSQ96S52 555 aa18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
PIKFYVE-206ENST00000443896 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 TEX33O43247 280 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 REXO1L1PQ8IX06 675 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 ADKP55263 362 aaKnown RBP18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 TTF2Q9UNY4 1162 aaKnown RBP18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 hCG_1984214I3L0E3 225 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 UBA7P41226 1012 aa18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 ZNF713Q8N859 430 aaPredicted RBP18.29■□□□□ 0.52
PIKFYVE-206ENST00000443896 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 MYO1CO00159 1063 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 MYL1P05976 194 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 SNHG28P0DPA3 235 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 AKR1B1P15121 316 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 CLCN6P51797 869 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 PAK1Q13153 545 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 AK8Q96MA6 479 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 L2HGDHQ9H9P8 463 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 ZSCAN12O43309 604 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 ETF1P62495 437 aaKnown RBP18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 ASPRV1Q53RT3 343 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
PIKFYVE-206ENST00000443896 OR52Z1P0C646 297 aa18.27■□□□□ 0.52
PIKFYVE-206ENST00000443896 PLA2G4AP47712 749 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms