RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SEPT4O43236 478 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 MFSD6Q6ZSS7 791 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 ARRDC4Q8NCT1 418 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 TRPV1Q8NER1 839 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 GMCL1Q96IK5 515 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 TINF2Q9BSI4 451 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 SLC38A10Q9HBR0 1119 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 RIPK3Q9Y572 518 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 A0A0G2JMZ2 1700 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 PFASO15067 1338 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 HIP1O00291 1037 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 ORC4O43929 436 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 FDX1P10109 184 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 CCDC96Q2M329 555 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 KCTD1Q719H9 257 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 FAM160B2Q86V87 743 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
USP6NL-203ENST00000443016 IL17RBQ9NRM6 502 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 FBXO40Q9UH90 709 aa10.32□□□□□ -0.76
USP6NL-203ENST00000443016 DIS3Q9Y2L1 958 aaKnown RBP10.32□□□□□ -0.76
USP6NL-203ENST00000443016 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
USP6NL-203ENST00000443016 KBTBD13C9JR72 458 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 DNM1LO00429 736 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 SYN1P17600 705 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
USP6NL-203ENST00000443016 GJC2Q5T442 439 aaPredicted RBP10.31□□□□□ -0.76
USP6NL-203ENST00000443016 RNF41Q9H4P4 317 aaPredicted RBP10.31□□□□□ -0.76
USP6NL-203ENST00000443016 MYH4Q9Y623 1939 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 ZNF213O14771 459 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 COL6A1P12109 1028 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 OAZ1P54368 228 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 ZNF792Q3KQV3 632 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 STAG1Q8WVM7 1258 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 FAM117AQ9C073 453 aa10.31□□□□□ -0.76
USP6NL-203ENST00000443016 RARBP10826 455 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 FXR1P51114 621 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP6NL-203ENST00000443016 RCSD1Q6JBY9 416 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 CHST13Q8NET6 341 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 ZMYM6O95789 1325 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 COL11A1P12107 1806 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-203ENST00000443016 ZNF236Q9UL36 1845 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 IGHA2P01877 340 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 FGRP09769 529 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 PCP11498 1178 aaKnown RBP10.3□□□□□ -0.76
USP6NL-203ENST00000443016 LRRC26Q2I0M4 334 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 ESR2Q92731 530 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 XPNPEP3Q9NQH7 507 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 TACC3Q9Y6A5 838 aa10.3□□□□□ -0.76
USP6NL-203ENST00000443016 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 TOP1P11387 765 aaKnown RBP10.29□□□□□ -0.76
USP6NL-203ENST00000443016 ALAS1P13196 640 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 PDE4AP27815 886 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 RASGRP2Q7LDG7 609 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 ACAD9Q9H845 621 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 PRKAG2Q9UGJ0 569 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 ZHX1Q9UKY1 873 aaPredicted RBP10.29□□□□□ -0.76
USP6NL-203ENST00000443016 AKR1A1P14550 325 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 RNF180Q86T96 592 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 MSL3Q8N5Y2 521 aaKnown RBP10.29□□□□□ -0.76
USP6NL-203ENST00000443016 TMEM47Q9BQJ4 181 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 RNF146Q9NTX7 359 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
USP6NL-203ENST00000443016 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 PLA2G6O60733 806 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
USP6NL-203ENST00000443016 SNAP25P60880 206 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
USP6NL-203ENST00000443016 IQCA1Q86XH1 822 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 FERMT2Q96AC1 680 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 TCP11L1Q9NUJ3 509 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 CTNNA3Q9UI47 895 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 FRMPD2Q68DX3 1309 aaPredicted RBP10.28□□□□□ -0.76
USP6NL-203ENST00000443016 PGK1P00558 417 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 SLC16A2P36021 539 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 ADCYAP1R1P41586 468 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 LRRC41Q15345 812 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 TTC14Q96N46 770 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 FAM184BQ9ULE4 1060 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 CCPG1Q9ULG6 757 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
USP6NL-203ENST00000443016 ZNFX1Q9P2E3 1918 aaKnown RBP10.27□□□□□ -0.76
USP6NL-203ENST00000443016 DNAJC25-GNG10A0A024R161 153 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 KDM4AO75164 1064 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 MAGEA10P43363 369 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 LBHD1Q9BQE6 289 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 ABHD16BQ9H3Z7 469 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 A0A1W2PPC1 479 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms