RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 C7orf61Q8IZ16 206 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 ESR2Q92731 530 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 MTMR7Q9Y216 660 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 RAD50Q92878 1312 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 SYNGAP1Q96PV0 1343 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 SNAI1O95863 264 aaPredicted RBP22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 SNHG28P0DPA3 235 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 PDHBP11177 359 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 SNAP25P60880 206 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 LRRC26Q2I0M4 334 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 TKFCQ3LXA3 575 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 RBM27Q9P2N5 1060 aaKnown RBP22.28■■□□□ 1.16
HMGB3P22-201ENST00000442010 CHMLP26374 656 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 CCDC96Q2M329 555 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 GJC2Q5T442 439 aaPredicted RBP22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 DGKHQ86XP1 1220 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 ANKRD35Q8N283 1001 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 ARRDC4Q8NCT1 418 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 ZKSCAN3Q9BRR0 538 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 HOMER2Q9NSB8 354 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 RNF146Q9NTX7 359 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
HMGB3P22-201ENST00000442010 MYH6P13533 1939 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 KDM4AO75164 1064 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 SLC16A2P36021 539 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 IMMTQ16891 758 aaKnown RBP22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 CCDC174Q6PII3 467 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 FAM133AQ8N9E0 248 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 ANKS1AQ92625 1134 aa22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 SENP6Q9GZR1 1112 aaPredicted RBP22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 FRMPD2Q68DX3 1309 aaPredicted RBP22.26■■□□□ 1.15
HMGB3P22-201ENST00000442010 B4E1Z4 1266 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 ICAM1P05362 532 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 FXR1P51114 621 aaKnown RBP eCLIP22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 ZNF543Q08ER8 600 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 LRRC41Q15345 812 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 SYDE2Q5VT97 1194 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 TRERF1Q96PN7 1200 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 ZSWIM5Q9P217 1185 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 CNPY2Q9Y2B0 182 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 LRRC37A2A6NM11 1700 aa22.25■■□□□ 1.15
HMGB3P22-201ENST00000442010 ALAS1P13196 640 aa22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 AKR1A1P14550 325 aa22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 MUM1L1Q5H9M0 696 aa22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 GDF15Q99988 308 aa22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 GPCPD1Q9NPB8 672 aa22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 ZMYND8Q9ULU4 1186 aaPredicted RBP22.24■■□□□ 1.15
HMGB3P22-201ENST00000442010 RARBP10826 455 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 CNTN2Q02246 1040 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 PTH1RQ03431 593 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 CCDC178Q5BJE1 867 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 IQCA1Q86XH1 822 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 RUFY2Q8WXA3 655 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 KATNBL1Q9H079 304 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 CCPG1Q9ULG6 757 aa22.23■■□□□ 1.15
HMGB3P22-201ENST00000442010 SOWAHBA6NEL2 793 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 SYN1P17600 705 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 ARMCX2Q7L311 632 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 ENAHQ8N8S7 591 aaPredicted RBP22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 LENG1Q96BZ8 264 aaPredicted RBP22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 ZSCAN10Q96SZ4 725 aaPredicted RBP22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 KRT23Q9C075 422 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 XPNPEP3Q9NQH7 507 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 ASTN1O14525 1302 aa22.22■■□□□ 1.15
HMGB3P22-201ENST00000442010 KBTBD13C9JR72 458 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 POTEB2H3BUK9 544 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 SGSM2O43147 1006 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 ACVR2BQ13705 512 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 SNX17Q15036 470 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 CCDC144CPQ8IYA2 1237 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 PNMA1Q8ND90 353 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 ABHD16BQ9H3Z7 469 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 CNNM2Q9H8M5 875 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 CYP39A1Q9NYL5 469 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 LAMA3Q16787 3333 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 LTBP2Q14767 1821 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 SZT2Q5T011 3432 aa22.21■■□□□ 1.15
HMGB3P22-201ENST00000442010 ADCY6O43306 1168 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 PGK1P00558 417 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 BMP8BP34820 402 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 ATN1P54259 1190 aaPredicted RBP22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 SLC39A5Q6ZMH5 540 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 FAM184BQ9ULE4 1060 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 PHF24Q9UPV7 400 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 TNKSO95271 1327 aa22.2■■□□□ 1.14
HMGB3P22-201ENST00000442010 A0A1W2PPC1 479 aa22.19■■□□□ 1.14
HMGB3P22-201ENST00000442010 CYP21A2P08686 494 aa22.19■■□□□ 1.14
HMGB3P22-201ENST00000442010 ADCYAP1R1P41586 468 aa22.19■■□□□ 1.14
HMGB3P22-201ENST00000442010 PCDH10Q9P2E7 1040 aa22.19■■□□□ 1.14
HMGB3P22-201ENST00000442010 ZHX1Q9UKY1 873 aaPredicted RBP22.19■■□□□ 1.14
HMGB3P22-201ENST00000442010 WDR19Q8NEZ3 1342 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 SYNRGQ9UMZ2 1314 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 GOLGA8HP0CJ92 632 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 RTP1P59025 263 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms