RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 HMGN5P82970 282 aaKnown RBP5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 PSMD2Q13200 908 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 BIRC2Q13490 618 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 KCNA10Q16322 511 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 L1TD1Q5T7N2 865 aaKnown RBP5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 EFCAB2Q5VUJ9 269 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 PCNX4Q63HM2 1172 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 LARP1BQ659C4 914 aaKnown RBP5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 LETMD1Q6P1Q0 360 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 TTC6Q86TZ1 520 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 ZSCAN30Q86W11 494 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 PDILTQ8N807 584 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 MFSD2AQ8NA29 543 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 ABHD4Q8TB40 342 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 RPS6KC1Q96S38 1066 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 NCAPGQ9BPX3 1015 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 SEZ6LQ9BYH1 1024 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 C22orf23Q9BZE7 217 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 CXorf56Q9H5V9 222 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 RETREG1Q9H6L5 497 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 DONSONQ9NYP3 566 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 DCTN4Q9UJW0 460 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 ODF2LQ9ULJ1 636 aa5.68□□□□□ -1.5
HMGB3P9-201ENST00000441799 CFTRP13569 1480 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 PES1O00541 588 aaKnown RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 TIMM44O43615 452 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 IGHDP01880 384 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 ZNF16P17020 682 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 CCT2P78371 535 aaKnown RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 TNK2Q07912 1038 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 KIAA2012Q0VF49 1180 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 CT47A1Q5JQC4 288 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 CCDC174Q6PII3 467 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 DRC7Q8IY82 874 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 GAL3ST3Q96A11 431 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 CDC5LQ99459 802 aaKnown RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 SMG5Q9UPR3 1016 aaKnown RBP5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 PAXBP1Q9Y5B6 917 aa5.67□□□□□ -1.5
HMGB3P9-201ENST00000441799 CST3P01034 146 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 INHBBP09529 407 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 TGFB3P10600 412 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 ZSCAN20P17040 1043 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 ABCD1P33897 745 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 TRPC1P48995 793 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 CCDC73Q6ZRK6 1079 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 HDXQ7Z353 690 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 HID1Q8IV36 788 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 MNS1Q8NEH6 495 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 VPS37AQ8NEZ2 397 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 ERCC4Q92889 916 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 CCDC120Q96HB5 630 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 C20orf173Q96LM9 149 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 POLR3CQ9BUI4 534 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 ADAMTS10Q9H324 1103 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 SP110Q9HB58 689 aa5.66□□□□□ -1.5
HMGB3P9-201ENST00000441799 AQRO60306 1485 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 MROH2BQ7Z745 1585 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 HPXP02790 462 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 COL6A1P12109 1028 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 KCNA2P16389 499 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 CD53P19397 219 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 GLDCP23378 1020 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 TBX4P57082 545 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 PRAMEF13Q5VWM6 474 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 SDE2Q6IQ49 451 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 EP400NLQ6ZTU2 488 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 FILIP1Q7Z7B0 1213 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 CDH24Q86UP0 819 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 SAMD3Q8N6K7 520 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 XAGE3Q8WTP9 111 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 MYLIPQ8WY64 445 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 KCNN1Q92952 543 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 MED4Q9NPJ6 270 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 SMC4Q9NTJ3 1288 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 UTP6Q9NYH9 597 aaKnown RBP5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 KNSTRNQ9Y448 316 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 SNCAIPQ9Y6H5 919 aa5.65□□□□□ -1.5
HMGB3P9-201ENST00000441799 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 CFAP65Q6ZU64 1925 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 GFRA2O00451 464 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 TPM3P06753 285 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 RAC2P15153 192 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 IBSPP21815 317 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 ATICP31939 592 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 GRK4P32298 578 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 TRHRP34981 398 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 HK2P52789 917 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 NAP1L1P55209 391 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 ETF1P62495 437 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 DCTN1Q14203 1278 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 CTR9Q6PD62 1173 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 OTUD6AQ7L8S5 288 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms