RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 CENPTQ96BT3 561 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 VMP1Q96GC9 406 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HHIPQ96QV1 700 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KLF16Q9BXK1 252 aaPredicted RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PUS7LQ9H0K6 701 aaKnown RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RIC8AQ9NPQ8 531 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 STK26Q9P289 416 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KCNH4Q9UQ05 1017 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ABCC10Q5T3U5 1492 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CHD1O14646 1710 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FSD2A1L4K1 749 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PRPF3O43395 683 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TSPY4P0CV99 314 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TSPY10P0CW01 314 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 XRCC6P12956 609 aaKnown RBP eCLIP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 OAS2P29728 719 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 STAT4Q14765 748 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZYXQ15942 572 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 WDR44Q5JSH3 913 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HYIQ5T013 277 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ERAP2Q6P179 960 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 UNC5AQ6ZN44 842 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LHFPL2Q6ZUX7 228 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PRICKLE2Q7Z3G6 844 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SNX32Q86XE0 403 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SPNS2Q8IVW8 549 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GAL3ST3Q96A11 431 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZNF496Q96IT1 587 aaPredicted RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MRPL4Q9BYD3 311 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LUZP4Q9P127 313 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DACH1Q9UI36 760 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DAAM1Q9Y4D1 1078 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RNF123Q5XPI4 1314 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LTBP3Q9NS15 1303 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SHANK2Q9UPX8 1470 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRBV23-1A0A0A0MS06 115 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RFPL1O75677 317 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NEK4P51957 841 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SPATS2Q86XZ4 545 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GRIN3AQ8TCU5 1115 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 JPH3Q8WXH2 748 aaPredicted RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SLC7A3Q8WY07 619 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CCDC94Q9BW85 323 aaPredicted RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GSX2Q9BZM3 304 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 XPO4Q9C0E2 1151 aaKnown RBP6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SPEF1Q9Y4P9 236 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ANKRD50Q9ULJ7 1429 aa6.8□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PZPP20742 1482 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRAV20A0A0B4J274 112 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GTPBP10A4D1E9 387 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 OFD1O75665 1012 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TCEA3O75764 348 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 F2P00734 622 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NEFHP12036 1026 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KCNQ4P56696 695 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PURAQ00577 322 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SV2CQ496J9 727 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SCUBE1Q8IWY4 988 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TSPY26PQ9H489 355 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NGRNQ9NPE2 291 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TIMMDC1Q9NPL8 285 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZFATQ9P243 1243 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CGNQ9P2M7 1197 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRHDEQ9UKU6 1024 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 VSTM5A8MXK1 200 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NFKBIEO00221 500 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PDE2AO00408 941 aaPredicted RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CHL1O00533 1208 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NPTXRO95502 500 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PLAURQ03405 335 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PICALMQ13492 652 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DHCR24Q15392 516 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZCCHC8Q6NZY4 707 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 OTUD6AQ7L8S5 288 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 BRSK2Q8IWQ3 736 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 IQCF2Q8IXL9 164 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MAP3K14Q99558 947 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 POLR3CQ9BUI4 534 aaPredicted RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DHX36Q9H2U1 1008 aaKnown RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CLEC4MQ9H2X3 399 aaPredicted RBP6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 POGKQ9P215 609 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 C9orf84Q5VXU9 1444 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KIAA1107Q9UPP5 1409 aa6.79□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZBED9Q6R2W3 1325 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TEX14Q8IWB6 1497 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 hCG_1984214I3L0E3 225 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HTR3BO95264 441 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ACRP10323 421 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ARNTP27540 789 aa6.78□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRPC1P48995 793 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms