RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CCDC155Q8N6L0 562 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 EPHB6O15197 1021 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 KRT2P35908 639 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 CCDC96Q2M329 555 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 CCNI2Q6ZMN8 369 aaPredicted RBP11.71□□□□□ -0.53
SCAF4-203ENST00000434667 TRIML1Q8N9V2 468 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 TRIM47Q96LD4 638 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 LRP2BPQ9P2M1 347 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 PACSIN2Q9UNF0 486 aaPredicted RBP11.71□□□□□ -0.53
SCAF4-203ENST00000434667 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.54
SCAF4-203ENST00000434667 RASSF10A6NK89 507 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.54
SCAF4-203ENST00000434667 LIFRP42702 1097 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 GUCY1A3Q02108 690 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC181Q5TID7 509 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 CHADLQ6NUI6 762 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 OR8K1Q8NGG5 319 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 IFT81Q8WYA0 676 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.544e-6■□□□□ 10.1
SCAF4-203ENST00000434667 CAPN7Q9Y6W3 813 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 MYH13Q9UKX3 1938 aa11.71□□□□□ -0.54
SCAF4-203ENST00000434667 PDE8BO95263 885 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 RPN1P04843 607 aaKnown RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 WDR93Q6P2C0 686 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 TAX1BP1Q86VP1 789 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 ANKRD18AQ8IVF6 992 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 ISCA1Q9BUE6 129 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 MKRN1Q9UHC7 482 aaKnown RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 TTMPQ5BVD1 217 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 KSR1Q8IVT5 923 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 MB21D1Q8N884 522 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 MARCH6O60337 910 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 PCCAP05165 728 aaPredicted RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
SCAF4-203ENST00000434667 UBE3CQ15386 1083 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 GIMAP7Q8NHV1 300 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 GSDMAQ96QA5 445 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 CAPS2Q9BXY5 557 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 CD248Q9HCU0 757 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 SALL4Q9UJQ4 1053 aa11.7□□□□□ -0.54
SCAF4-203ENST00000434667 MYH10P35580 1976 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 MYO1BO43795 1136 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 FCER1AP12319 257 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 WASF1Q92558 559 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
SCAF4-203ENST00000434667 NLRP5P59047 1200 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 NPY5RQ15761 445 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCAF4-203ENST00000434667 EBAG9O00559 213 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 CYP7A1P22680 504 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 KIRREL3Q8IZU9 778 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 JPH2Q9BR39 696 aaPredicted RBP11.69□□□□□ -0.54
SCAF4-203ENST00000434667 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
SCAF4-203ENST00000434667 RPS6KA5O75582 802 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 STAT6P42226 847 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 VGLL2Q8N8G2 317 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 TMEM60Q9H2L4 133 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 CYP2D6P10635 497 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 CDR1P51861 262 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 TBC1D8BQ0IIM8 1120 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 CCDC178Q5BJE1 867 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 CT47A1Q5JQC4 288 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 PSMD14O00487 310 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 HPDP32754 393 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 CTSWP56202 376 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
SCAF4-203ENST00000434667 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-203ENST00000434667 ARID5AQ03989 594 aa11.67□□□□□ -0.54
SCAF4-203ENST00000434667 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
SCAF4-203ENST00000434667 NLRP10Q86W26 655 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms