RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
EDEM1-202ENST00000434243 RNF146Q9NTX7 359 aa15.72■□□□□ 0.11
EDEM1-202ENST00000434243 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
EDEM1-202ENST00000434243 SYNGAP1Q96PV0 1343 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 SOX1O00570 391 aaPredicted RBP15.71■□□□□ 0.11
EDEM1-202ENST00000434243 ZNF213O14771 459 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 FGRP09769 529 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 TOP1P11387 765 aaKnown RBP15.71■□□□□ 0.11
EDEM1-202ENST00000434243 TRIM60Q495X7 471 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 AKNAD1Q5T1N1 836 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 MAMDC4Q6UXC1 1216 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 ZNF467Q7Z7K2 595 aaPredicted RBP15.71■□□□□ 0.11
EDEM1-202ENST00000434243 TDHQ8IZJ6 230 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 DCAF4Q8WV16 495 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 TMEM47Q9BQJ4 181 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
EDEM1-202ENST00000434243 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
EDEM1-202ENST00000434243 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.71■□□□□ 0.11
EDEM1-202ENST00000434243 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
EDEM1-202ENST00000434243 HIP1O00291 1037 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 PLA2G6O60733 806 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 SLC16A2P36021 539 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
EDEM1-202ENST00000434243 CNTN2Q02246 1040 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 ACVR2BQ13705 512 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 TKFCQ3LXA3 575 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
EDEM1-202ENST00000434243 PARP14Q460N5 1801 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 ALPK3Q96L96 1907 aa15.7■□□□□ 0.1
EDEM1-202ENST00000434243 ZNF536O15090 1300 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.69■□□□□ 0.1
EDEM1-202ENST00000434243 ARMCX2Q7L311 632 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 TBC1D10CQ8IV04 446 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 CCDC144CPQ8IYA2 1237 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 ESR2Q92731 530 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 ABHD16BQ9H3Z7 469 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 A1CFQ9NQ94 594 aaKnown RBP15.69■□□□□ 0.1
EDEM1-202ENST00000434243 TCP11L1Q9NUJ3 509 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 PHF24Q9UPV7 400 aa15.69■□□□□ 0.1
EDEM1-202ENST00000434243 PCP11498 1178 aaKnown RBP15.68■□□□□ 0.1
EDEM1-202ENST00000434243 NOVP48745 357 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 MUM1L1Q5H9M0 696 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 NSMFQ6X4W1 530 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
EDEM1-202ENST00000434243 ZKSCAN3Q9BRR0 538 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 MYH4Q9Y623 1939 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 SYNRGQ9UMZ2 1314 aa15.68■□□□□ 0.1
EDEM1-202ENST00000434243 A0A1W2PQ45 241 aaPredicted RBP15.67■□□□□ 0.1
EDEM1-202ENST00000434243 A0A1W2PQY0 241 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 ADAMTS4O75173 837 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 DUSP11O75319 330 aaKnown RBP15.67■□□□□ 0.1
EDEM1-202ENST00000434243 ICAM1P05362 532 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 C6orf222P0C671 652 aaPredicted RBP15.67■□□□□ 0.1
EDEM1-202ENST00000434243 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 FAM133AQ8N9E0 248 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 VTI1AQ96AJ9 217 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 FGD4Q96M96 766 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 TTC14Q96N46 770 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 STARD7Q9NQZ5 370 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 NEDD4P46934 1319 aa15.67■□□□□ 0.1
EDEM1-202ENST00000434243 SOWAHBA6NEL2 793 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 ASB14A6NK59 587 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 PQBP1O60828 265 aaKnown RBP15.66■□□□□ 0.1
EDEM1-202ENST00000434243 PDHBP11177 359 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 ACLYP53396 1101 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 TLE2Q04725 743 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 SNX17Q15036 470 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 KCNA10Q16322 511 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 IMMTQ16891 758 aaKnown RBP15.66■□□□□ 0.1
EDEM1-202ENST00000434243 LRIT3Q3SXY7 679 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 C1orf53Q5VUE5 145 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 NUP133Q8WUM0 1156 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 TSEN34Q9BSV6 310 aaKnown RBP15.66■□□□□ 0.1
EDEM1-202ENST00000434243 RANBP17Q9H2T7 1088 aaKnown RBP15.66■□□□□ 0.1
EDEM1-202ENST00000434243 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
EDEM1-202ENST00000434243 MYADML2A6NDP7 307 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 KDM4AO75164 1064 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
EDEM1-202ENST00000434243 BTNL9Q6UXG8 535 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 EEPD1Q7L9B9 569 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 BADQ92934 168 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 DSCC1Q9BVC3 393 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 CYP39A1Q9NYL5 469 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 CTNNA3Q9UI47 895 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 TRIOBPQ9H2D6 2365 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 CEP290O15078 2479 aa15.65■□□□□ 0.1
EDEM1-202ENST00000434243 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
EDEM1-202ENST00000434243 TRIM43BA6NCK2 446 aa15.64■□□□□ 0.09
EDEM1-202ENST00000434243 B4E1Z4 1266 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms