RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 BAG3O95817 575 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 KRT14P02533 472 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 LDHCP07864 332 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 MYBL2P10244 700 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 RPS8P62241 208 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 SATB1Q01826 763 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 MORC3Q14149 939 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 CPLX4Q7Z7G2 160 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 FMNL3Q8IVF7 1028 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 NELFBQ8WX92 580 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 ALS2CR12Q96Q35 445 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 ADD3Q9UEY8 706 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-203ENST00000434046 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 ZMYM6O95789 1325 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 SALL1Q9NSC2 1324 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 BACH1O14867 736 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 ZNF18P17022 549 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 HIBADHP31937 336 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 MCAMP43121 646 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 MMP14P50281 582 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 PAK1Q13153 545 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 UBE3CQ15386 1083 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 TDRD12Q587J7 1177 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 IFIT1BQ5T764 474 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 KCNV1Q6PIU1 500 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 PLIN2Q99541 437 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 SMARCAL1Q9NZC9 954 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 KCNQ2O43526 872 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 BUB1BO60566 1050 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 PRPF6O94906 941 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 PAX7P23759 505 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 ADD2P35612 726 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 TRIM14Q14142 442 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 SCARF1Q14162 830 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 EZH2Q15910 746 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 APOA5Q6Q788 366 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 CNBD1Q8NA66 436 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 LRRC1Q9BTT6 524 aa8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 TRIM6Q9C030 488 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 COL5A2P05997 1499 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-203ENST00000434046 ESYT3A0FGR9 886 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 SKAP2O75563 359 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 ERCC3P19447 782 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 AARSP49588 968 aaKnown RBP eCLIP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 APBA1Q02410 837 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 PTPAQ15257 358 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 IFNL3Q8IZI9 196 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 NBPF3Q9H094 633 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 ZNF287Q9HBT7 754 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 HPS5Q9UPZ3 1129 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 SLIT3O75094 1523 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 PRDM1O75626 825 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 NR1D1P20393 614 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 MICAL1Q8TDZ2 1067 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 SMCR8Q8TEV9 937 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 TANGO6Q9C0B7 1094 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 VPS54Q9P1Q0 977 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 TTC26A0AVF1 554 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 A6NNZ2 444 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 EPHB4P54760 987 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 GUCY2DQ02846 1103 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 CCDC178Q5BJE1 867 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 NAIF1Q69YI7 327 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 SYMPKQ92797 1274 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 CCDC47Q96A33 483 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 PIH1D3Q9NQM4 214 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 INCENPQ9NQS7 918 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 MCM9Q9NXL9 1143 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 DMGDHQ9UI17 866 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 STX8Q9UNK0 236 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 NEDD4P46934 1319 aa8.23□□□□□ -1.09
SYNPO2-203ENST00000434046 CD44P16070 742 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 PTPREP23469 700 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 RBM5P52756 815 aaKnown RBP eCLIP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 NLRP5P59047 1200 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 IFFO1Q0D2I5 559 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 PPP1R7Q15435 360 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 TYW1BQ6NUM6 668 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 TRAPPC11Q7Z392 1133 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 TAX1BP1Q86VP1 789 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 SPATS2Q86XZ4 545 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 NFU1Q9UMS0 254 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 RFX7Q2KHR2 1363 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 CLTAP09496 248 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 GSCP56915 257 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms