RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.87■■□□□ 1.89
HOMER3-203ENST00000433218 SMC5Q8IY18 1101 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 DDX11Q96FC9 970 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 GMCL1Q96IK5 515 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 HELLSQ9NRZ9 838 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 NRBP1Q9UHY1 535 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 PHF24Q9UPV7 400 aa26.87■■□□□ 1.89
HOMER3-203ENST00000433218 SYNGAP1Q96PV0 1343 aa26.86■■□□□ 1.89
HOMER3-203ENST00000433218 AKR1A1P14550 325 aa26.86■■□□□ 1.89
HOMER3-203ENST00000433218 SLC1A4P43007 532 aa26.86■■□□□ 1.89
HOMER3-203ENST00000433218 LRIT3Q3SXY7 679 aa26.86■■□□□ 1.89
HOMER3-203ENST00000433218 A0A1W2PQ45 241 aaPredicted RBP26.85■■□□□ 1.89
HOMER3-203ENST00000433218 A0A1W2PQY0 241 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 FGAP02671 866 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 ITGB8P26012 769 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 CCDC174Q6PII3 467 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 MAMDC4Q6UXC1 1216 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 TBC1D10CQ8IV04 446 aa26.85■■□□□ 1.89
HOMER3-203ENST00000433218 CTDP1Q9Y5B0 961 aaPredicted RBP26.85■■□□□ 1.89
HOMER3-203ENST00000433218 TRIM43BA6NCK2 446 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 TRIM6-TRIM34B2RNG4 842 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 HSPD1P10809 573 aaKnown RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 IKQ13123 557 aaPredicted RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 RRP12Q5JTH9 1297 aaKnown RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 ANKRD35Q8N283 1001 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 TRIM43Q96BQ3 446 aaPredicted RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 KATNBL1Q9H079 304 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 A1CFQ9NQ94 594 aaKnown RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 RNF146Q9NTX7 359 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.84■■□□□ 1.89
HOMER3-203ENST00000433218 CNPY2Q9Y2B0 182 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 CCDC171Q6TFL3 1326 aa26.84■■□□□ 1.89
HOMER3-203ENST00000433218 VCANP13611 3396 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 ORC4O43929 436 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 FGRP09769 529 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 NOVP48745 357 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 OAZ1P54368 228 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 ALX1Q15699 326 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 MCMDC2Q4G0Z9 681 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 MUM1L1Q5H9M0 696 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 TTBK2Q6IQ55 1244 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 ARMCX2Q7L311 632 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 RILPL2Q969X0 211 aa26.83■■□□□ 1.89
HOMER3-203ENST00000433218 C9orf50Q5SZB4 431 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 PLEKHM2Q8IWE5 1019 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 STAG1Q8WVM7 1258 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 PURBQ96QR8 312 aaKnown RBP26.82■■□□□ 1.88
HOMER3-203ENST00000433218 TOMM22Q9NS69 142 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 PRR12Q9ULL5 1215 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 NEDD4P46934 1319 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 TLE2Q04725 743 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 CCDC144CPQ8IYA2 1237 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 CHST13Q8NET6 341 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 BADQ92934 168 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 ACAD9Q9H845 621 aa26.82■■□□□ 1.88
HOMER3-203ENST00000433218 ZMYM6O95789 1325 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 FRMPD2Q68DX3 1309 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-203ENST00000433218 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-203ENST00000433218 SOWAHBA6NEL2 793 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 ALAS1P13196 640 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 SLC16A2P36021 539 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 CCDC96Q2M329 555 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 ZNF467Q7Z7K2 595 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-203ENST00000433218 CHD1LQ86WJ1 897 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 DEFB123Q8N688 67 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 FAM133AQ8N9E0 248 aa26.81■■□□□ 1.88
HOMER3-203ENST00000433218 LBHD1Q9BQE6 289 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-203ENST00000433218 GBF1Q92538 1859 aa26.8■■□□□ 1.88
HOMER3-203ENST00000433218 ACVR2BQ13705 512 aa26.8■■□□□ 1.88
HOMER3-203ENST00000433218 CCDC144BQ3MJ40 725 aa26.8■■□□□ 1.88
HOMER3-203ENST00000433218 CCSAPQ6IQ19 270 aaPredicted RBP26.8■■□□□ 1.88
HOMER3-203ENST00000433218 RNF180Q86T96 592 aa26.8■■□□□ 1.88
HOMER3-203ENST00000433218 FAM160B2Q86V87 743 aa26.8■■□□□ 1.88
HOMER3-203ENST00000433218 MSL3Q8N5Y2 521 aaKnown RBP26.8■■□□□ 1.88
HOMER3-203ENST00000433218 PQBP1O60828 265 aaKnown RBP26.79■■□□□ 1.88
HOMER3-203ENST00000433218 NUCB1Q02818 461 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 ERICH6BQ5W0A0 696 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 RCSD1Q6JBY9 416 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 KLHDC9Q8NEP7 349 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 TMEM47Q9BQJ4 181 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 IL25Q9H293 177 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 FBXO40Q9UH90 709 aa26.79■■□□□ 1.88
HOMER3-203ENST00000433218 C1orf53Q5VUE5 145 aa26.78■■□□□ 1.88
HOMER3-203ENST00000433218 CHURC1Q8WUH1 139 aa26.78■■□□□ 1.88
HOMER3-203ENST00000433218 TRERF1Q96PN7 1200 aa26.78■■□□□ 1.88
HOMER3-203ENST00000433218 PRKAG2Q9UGJ0 569 aa26.78■■□□□ 1.88
HOMER3-203ENST00000433218 FAM184BQ9ULE4 1060 aa26.78■■□□□ 1.88
HOMER3-203ENST00000433218 CTAGE5O15320 804 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 PLA2G6O60733 806 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 SDSP20132 328 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 ACLYP53396 1101 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 SHHQ15465 462 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 TMEM63BQ5T3F8 832 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 CHD9Q3L8U1 2897 aa26.77■■□□□ 1.88
HOMER3-203ENST00000433218 EPHB4P54760 987 aa26.76■■□□□ 1.87
HOMER3-203ENST00000433218 KCNA10Q16322 511 aa26.76■■□□□ 1.87
HOMER3-203ENST00000433218 CCDC136Q96JN2 1154 aa26.76■■□□□ 1.87
HOMER3-203ENST00000433218 POTEB2H3BUK9 544 aa26.75■■□□□ 1.87
HOMER3-203ENST00000433218 DUSP11O75319 330 aaKnown RBP26.75■■□□□ 1.87
HOMER3-203ENST00000433218 C6orf222P0C671 652 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms