RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 IL17RBQ9NRM6 502 aa14.21□□□□□ -0.13
TTC3-208ENST00000428693 RNF146Q9NTX7 359 aa14.21□□□□□ -0.13
TTC3-208ENST00000428693 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.21□□□□□ -0.13
TTC3-208ENST00000428693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
TTC3-208ENST00000428693 SYNGAP1Q96PV0 1343 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 SNAI1O95863 264 aaPredicted RBP14.2□□□□□ -0.14
TTC3-208ENST00000428693 FGAP02671 866 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 C6orf222P0C671 652 aaPredicted RBP14.2□□□□□ -0.14
TTC3-208ENST00000428693 FDX1P10109 184 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 OAZ1P54368 228 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 CNTN2Q02246 1040 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 TLE2Q04725 743 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 ACVR2BQ13705 512 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 RCSD1Q6JBY9 416 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
TTC3-208ENST00000428693 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 BADQ92934 168 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 TRERF1Q96PN7 1200 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 SPC25Q9HBM1 224 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 PHF24Q9UPV7 400 aa14.2□□□□□ -0.14
TTC3-208ENST00000428693 FRMPD2Q68DX3 1309 aaPredicted RBP14.19□□□□□ -0.14
TTC3-208ENST00000428693 A0A1W2PQ45 241 aaPredicted RBP14.19□□□□□ -0.14
TTC3-208ENST00000428693 A0A1W2PQY0 241 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
TTC3-208ENST00000428693 SLC16A2P36021 539 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 KCNA10Q16322 511 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 NSMFQ6X4W1 530 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 ARMCX2Q7L311 632 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 SH3RF1Q7Z6J0 888 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 ZNF589Q86UQ0 364 aaPredicted RBP14.19□□□□□ -0.14
TTC3-208ENST00000428693 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 GPCPD1Q9NPB8 672 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 STARD7Q9NQZ5 370 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 TACC3Q9Y6A5 838 aa14.19□□□□□ -0.14
TTC3-208ENST00000428693 CCDC171Q6TFL3 1326 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 SYNRGQ9UMZ2 1314 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 MCM3APO60318 1980 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 DNAJC25-GNG10A0A024R161 153 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 ORC4O43929 436 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 IGHDP01880 384 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
TTC3-208ENST00000428693 AAMPQ13685 434 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 ALX1Q15699 326 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 CCDC144BQ3MJ40 725 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
TTC3-208ENST00000428693 MFSD6Q6ZSS7 791 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 NUP133Q8WUM0 1156 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 DCAF4Q8WV16 495 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 ABHD16BQ9H3Z7 469 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 DIAPH3Q9NSV4 1193 aa14.18□□□□□ -0.14
TTC3-208ENST00000428693 TRIM43BA6NCK2 446 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 ADAMTS4O75173 837 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 CLTBP09497 229 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 RAG1P15918 1043 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 SDSP20132 328 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 ACLYP53396 1101 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 TKFCQ3LXA3 575 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 TTBK2Q6IQ55 1244 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 TRIM43Q96BQ3 446 aaPredicted RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 FAM161BQ96MY7 647 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 TMEM47Q9BQJ4 181 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 A1CFQ9NQ94 594 aaKnown RBP14.17□□□□□ -0.14
TTC3-208ENST00000428693 TMEM39AQ9NV64 488 aa14.17□□□□□ -0.14
TTC3-208ENST00000428693 ZNF536O15090 1300 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 ASB14A6NK59 587 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 SNX17Q15036 470 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 SHHQ15465 462 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 SMC5Q8IY18 1101 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 GLT1D1Q96MS3 346 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 ZKSCAN3Q9BRR0 538 aa14.16□□□□□ -0.14
TTC3-208ENST00000428693 TSEN34Q9BSV6 310 aaKnown RBP14.16□□□□□ -0.14
TTC3-208ENST00000428693 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
TTC3-208ENST00000428693 PTPDC1A2A3K4 754 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 MOXD2PA6NHM9 499 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 ZNF213O14771 459 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 NUCB1Q02818 461 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 C9orf50Q5SZB4 431 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 SYDE2Q5VT97 1194 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 GPR153Q6NV75 609 aa14.15□□□□□ -0.14
TTC3-208ENST00000428693 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms