RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ZNF865P0CJ78 1059 aaPredicted RBP15□□□□□ -0.01
GPC1-204ENST00000426280 PCP11498 1178 aaKnown RBP15□□□□□ -0.01
GPC1-204ENST00000426280 IRX5P78411 483 aaPredicted RBP15□□□□□ -0.01
GPC1-204ENST00000426280 ZNF543Q08ER8 600 aa15□□□□□ -0.01
GPC1-204ENST00000426280 IKQ13123 557 aaPredicted RBP15□□□□□ -0.01
GPC1-204ENST00000426280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15□□□□□ -0.01
GPC1-204ENST00000426280 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
GPC1-204ENST00000426280 ENAHQ8N8S7 591 aaPredicted RBP15□□□□□ -0.01
GPC1-204ENST00000426280 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
GPC1-204ENST00000426280 ZSCAN10Q96SZ4 725 aaPredicted RBP15□□□□□ -0.01
GPC1-204ENST00000426280 UBA5Q9GZZ9 404 aa15□□□□□ -0.01
GPC1-204ENST00000426280 C11orf49Q9H6J7 331 aa15□□□□□ -0.01
GPC1-204ENST00000426280 DIS3Q9Y2L1 958 aaKnown RBP15□□□□□ -0.01
GPC1-204ENST00000426280 LAMA4Q16363 1823 aa15□□□□□ -0.01
GPC1-204ENST00000426280 SMCHD1A6NHR9 2005 aa15□□□□□ -0.01
GPC1-204ENST00000426280 ADCY6O43306 1168 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 ALAS1P13196 640 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 OAZ1P54368 228 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 SEC23AQ15436 765 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 GJC2Q5T442 439 aaPredicted RBP14.99□□□□□ -0.01
GPC1-204ENST00000426280 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 MAP4K1Q92918 833 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 DDX11Q96FC9 970 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 TRERF1Q96PN7 1200 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 RANBP17Q9H2T7 1088 aaKnown RBP14.99□□□□□ -0.01
GPC1-204ENST00000426280 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
GPC1-204ENST00000426280 RNF146Q9NTX7 359 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 CTNNA3Q9UI47 895 aa14.99□□□□□ -0.01
GPC1-204ENST00000426280 COLQQ9Y215 455 aaPredicted RBP14.99□□□□□ -0.01
GPC1-204ENST00000426280 CTDP1Q9Y5B0 961 aaPredicted RBP14.99□□□□□ -0.01
GPC1-204ENST00000426280 RAD50Q92878 1312 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 SEPT4O43236 478 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 PTGS1P23219 599 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 LRRC26Q2I0M4 334 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 SLC35G1Q2M3R5 365 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 CHST13Q8NET6 341 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 HTATIP2Q9BUP3 242 aa14.98□□□□□ -0.01
GPC1-204ENST00000426280 LSG1Q9H089 658 aaKnown RBP14.98□□□□□ -0.01
GPC1-204ENST00000426280 GPHNQ9NQX3 736 aaPredicted RBP14.98□□□□□ -0.01
GPC1-204ENST00000426280 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 TNKSO95271 1327 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 E7EWF7 191 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 COPB2P35606 906 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 TMEM63BQ5T3F8 832 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 MAMDC4Q6UXC1 1216 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 STAG2Q8N3U4 1231 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 FAM133AQ8N9E0 248 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 PNMA1Q8ND90 353 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 CLEC4DQ8WXI8 215 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 ESYT1Q9BSJ8 1104 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 KATNBL1Q9H079 304 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 SLC5A4Q9NY91 659 aa14.97□□□□□ -0.01
GPC1-204ENST00000426280 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
GPC1-204ENST00000426280 NFIBO00712 420 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 ICAM1P05362 532 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 FDX1P10109 184 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 ANTXR2P58335 489 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 C7orf61Q8IZ16 206 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 KRT23Q9C075 422 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 SENP6Q9GZR1 1112 aaPredicted RBP14.96□□□□□ -0.01
GPC1-204ENST00000426280 ACAD9Q9H845 621 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.01
GPC1-204ENST00000426280 ZMYND8Q9ULU4 1186 aaPredicted RBP14.96□□□□□ -0.01
GPC1-204ENST00000426280 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
GPC1-204ENST00000426280 EVI5O60447 810 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 PGK1P00558 417 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 SYN1P17600 705 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 CAPN2P17655 700 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
GPC1-204ENST00000426280 HABP4Q5JVS0 413 aaKnown RBP14.95□□□□□ -0.02
GPC1-204ENST00000426280 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 CCDC144CPQ8IYA2 1237 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 PRO3102Q9H379 93 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.95□□□□□ -0.02
GPC1-204ENST00000426280 CYP39A1Q9NYL5 469 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
GPC1-204ENST00000426280 MYADML2A6NDP7 307 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 POTEB2H3BUK9 544 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
GPC1-204ENST00000426280 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
GPC1-204ENST00000426280 LRRC41Q15345 812 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 NSMFQ6X4W1 530 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 ARMCX2Q7L311 632 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
GPC1-204ENST00000426280 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 MB21D2Q8IYB1 491 aaPredicted RBP14.94□□□□□ -0.02
GPC1-204ENST00000426280 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 FERMT2Q96AC1 680 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 KAT14Q9H8E8 782 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 VAT1LQ9HCJ6 419 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 PDGFCQ9NRA1 345 aa14.94□□□□□ -0.02
GPC1-204ENST00000426280 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.93□□□□□ -0.02
GPC1-204ENST00000426280 DNM1LO00429 736 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms