RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 STK3Q13188 491 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 CDC37Q16543 378 aaPredicted RBP27.91■■■□□ 2.06
APOE-202ENST00000425718 SRBD1Q8N5C6 995 aaKnown RBP27.91■■■□□ 2.06
APOE-202ENST00000425718 REPS2Q8NFH8 660 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 LARP6Q9BRS8 491 aaKnown RBP27.91■■■□□ 2.06
APOE-202ENST00000425718 VAT1LQ9HCJ6 419 aa27.91■■■□□ 2.06
APOE-202ENST00000425718 FAM217BQ9NTX9 383 aaPredicted RBP27.91■■■□□ 2.06
APOE-202ENST00000425718 PNMA6FA0A0J9YX94 578 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 ADD1P35611 737 aaKnown RBP27.9■■■□□ 2.06
APOE-202ENST00000425718 SP3Q02447 781 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 PLS1Q14651 629 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 TMEM132BQ14DG7 1078 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 RIOX2Q8IUF8 465 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 SNX21Q969T3 373 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 RNF26Q9BY78 433 aaPredicted RBP27.9■■■□□ 2.06
APOE-202ENST00000425718 MAF1Q9H063 256 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 FBXO40Q9UH90 709 aa27.9■■■□□ 2.06
APOE-202ENST00000425718 ZNF214Q9UL59 606 aaPredicted RBP27.9■■■□□ 2.06
APOE-202ENST00000425718 hCG_1984214I3L0E3 225 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 GPR25O00155 361 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 MAPK4P31152 587 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 SCRN1Q12765 414 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 ZNF713Q8N859 430 aaPredicted RBP27.89■■■□□ 2.06
APOE-202ENST00000425718 AMNQ9BXJ7 453 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 MROH8Q9H579 483 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 CWC22Q9HCG8 908 aaKnown RBP27.89■■■□□ 2.06
APOE-202ENST00000425718 BTBD7Q9P203 1132 aa27.89■■■□□ 2.06
APOE-202ENST00000425718 CNTNAP5Q8WYK1 1306 aa27.89■■■□□ 2.05
APOE-202ENST00000425718 CYTH3O43739 400 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 FKTNO75072 461 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 CNMDO75829 334 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 SSRP1Q08945 709 aaKnown RBP27.88■■■□□ 2.05
APOE-202ENST00000425718 SNRNP48Q6IEG0 339 aaKnown RBP27.88■■■□□ 2.05
APOE-202ENST00000425718 FBXO11Q86XK2 927 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 CPXCR1Q8N123 301 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 CHST13Q8NET6 341 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 ERO1AQ96HE7 468 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 LLPHQ9BRT6 129 aaKnown RBP27.88■■■□□ 2.05
APOE-202ENST00000425718 TXNRD2Q9NNW7 524 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 CCPG1Q9ULG6 757 aa27.88■■■□□ 2.05
APOE-202ENST00000425718 QRICH1Q2TAL8 776 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 CCDC174Q6PII3 467 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 HOMER1Q86YM7 354 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 HSCBQ8IWL3 235 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 CPVLQ9H3G5 476 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 NCOA5Q9HCD5 579 aaKnown RBP27.87■■■□□ 2.05
APOE-202ENST00000425718 RAVER2Q9HCJ3 691 aaKnown RBP27.87■■■□□ 2.05
APOE-202ENST00000425718 ABCB11O95342 1321 aa27.87■■■□□ 2.05
APOE-202ENST00000425718 ZNFX1Q9P2E3 1918 aaKnown RBP27.86■■■□□ 2.05
APOE-202ENST00000425718 SMCHD1A6NHR9 2005 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 PRPF3O43395 683 aaKnown RBP27.86■■■□□ 2.05
APOE-202ENST00000425718 CTCFP49711 727 aaPredicted RBP27.86■■■□□ 2.05
APOE-202ENST00000425718 NTRK3Q16288 839 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 NBPF11Q86T75 865 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 CCDC82Q8N4S0 544 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 PIGSQ96S52 555 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 STK36Q9NRP7 1315 aa27.86■■■□□ 2.05
APOE-202ENST00000425718 PCNTO95613 3336 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 GNRH1P01148 92 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 FUT2Q10981 343 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 TEX2Q8IWB9 1127 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 FAM177A1Q8N128 213 aaPredicted RBP27.85■■■□□ 2.05
APOE-202ENST00000425718 WASF1Q92558 559 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 TMX3Q96JJ7 454 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 MOV10L1Q9BXT6 1211 aaKnown RBP27.85■■■□□ 2.05
APOE-202ENST00000425718 MRPL11Q9Y3B7 192 aaKnown RBP27.85■■■□□ 2.05
APOE-202ENST00000425718 IVNS1ABPQ9Y6Y0 642 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 RBBP6Q7Z6E9 1792 aaKnown RBP27.85■■■□□ 2.05
APOE-202ENST00000425718 DOCK3Q8IZD9 2030 aa27.85■■■□□ 2.05
APOE-202ENST00000425718 PLXNB2O15031 1838 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 STRNO43815 780 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 DEXIO95424 95 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 FMNL1O95466 1100 aaPredicted RBP27.84■■■□□ 2.05
APOE-202ENST00000425718 HSPA1AP0DMV8 641 aaKnown RBP27.84■■■□□ 2.05
APOE-202ENST00000425718 HSPA1BP0DMV9 641 aaKnown RBP27.84■■■□□ 2.05
APOE-202ENST00000425718 FCGRTP55899 365 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 LACTBP83111 547 aaPredicted RBP27.84■■■□□ 2.05
APOE-202ENST00000425718 NCAPG2Q86XI2 1143 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 SAMD3Q8N6K7 520 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 CCDC12Q8WUD4 166 aaPredicted RBP27.84■■■□□ 2.05
APOE-202ENST00000425718 ZNF536O15090 1300 aa27.84■■■□□ 2.05
APOE-202ENST00000425718 LARGE1O95461 756 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 HOXD10P28358 340 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 HMGN5P82970 282 aaKnown RBP27.83■■■□□ 2.05
APOE-202ENST00000425718 Q3C1V9 767 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 POTEEQ6S8J3 1075 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.83■■■□□ 2.056e-9■■□□□ 12.5
APOE-202ENST00000425718 CMTR1Q8N1G2 835 aaKnown RBP27.83■■■□□ 2.05
APOE-202ENST00000425718 SLC26A6Q9BXS9 759 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 R3HDMLQ9H3Y0 253 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 ACAD9Q9H845 621 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 KIF3AQ9Y496 699 aa27.83■■■□□ 2.05
APOE-202ENST00000425718 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.83■■■□□ 2.05
APOE-202ENST00000425718 V9GY48 417 aaPredicted RBP27.83■■■□□ 2.05
APOE-202ENST00000425718 K7ELQ4 463 aaPredicted RBP27.82■■■□□ 2.04
APOE-202ENST00000425718 ALAS1P13196 640 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 MCF2L2Q86YR7 1114 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 CCDC83Q8IWF9 413 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 NECAB1Q8N987 351 aa27.82■■■□□ 2.04
APOE-202ENST00000425718 COA7Q96BR5 231 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms