RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ZNF543Q08ER8 600 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 CCDC174Q6PII3 467 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 CYB5R4Q7L1T6 521 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 NECAB2Q7Z6G3 386 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 ZSCAN10Q96SZ4 725 aaPredicted RBP20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 TINF2Q9BSI4 451 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 HTATIP2Q9BUP3 242 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 KRT23Q9C075 422 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 PFASO15067 1338 aa20.97■□□□□ 0.95
SBDSP1-202ENST00000423945 COL6A1P12109 1028 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 DPF3Q92784 378 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 MAP4K1Q92918 833 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 RNF146Q9NTX7 359 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 FBXO40Q9UH90 709 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 TNKSO95271 1327 aa20.96■□□□□ 0.95
SBDSP1-202ENST00000423945 H0YGN5 161 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 SEPT4O43236 478 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 SEC23AQ15436 765 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 MUM1L1Q5H9M0 696 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 ANO1Q5XXA6 986 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 STOX1Q6ZVD7 989 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 IQCA1Q86XH1 822 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 PNMA1Q8ND90 353 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 ACAD9Q9H845 621 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 CNNM2Q9H8M5 875 aa20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 A1CFQ9NQ94 594 aaKnown RBP20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
SBDSP1-202ENST00000423945 MSCO60682 206 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 SNAI1O95863 264 aaPredicted RBP20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 ZNF865P0CJ78 1059 aaPredicted RBP20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 ALAS1P13196 640 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 TKFCQ3LXA3 575 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 CCDC178Q5BJE1 867 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 BMP2KLQ5H9B9 411 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 MAMDC4Q6UXC1 1216 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 ANKRD35Q8N283 1001 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 TRERF1Q96PN7 1200 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 ESYT1Q9BSJ8 1104 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 LSG1Q9H089 658 aaKnown RBP20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 CPVLQ9H3G5 476 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 C11orf49Q9H6J7 331 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 DNAH12Q6ZR08 3092 aa20.94■□□□□ 0.94
SBDSP1-202ENST00000423945 ICAM1P05362 532 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 CNTN2Q02246 1040 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 FAM133AQ8N9E0 248 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 KAT14Q9H8E8 782 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 NRBP1Q9UHY1 535 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 RBM8AQ9Y5S9 174 aaKnown RBP20.93■□□□□ 0.94
SBDSP1-202ENST00000423945 E7EWF7 191 aa20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 ZNF467Q7Z7K2 595 aaPredicted RBP20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 UBA5Q9GZZ9 404 aa20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 ASTN1O14525 1302 aa20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 SYNGAP1Q96PV0 1343 aa20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 LRRC37A2A6NM11 1700 aa20.92■□□□□ 0.94
SBDSP1-202ENST00000423945 SOWAHBA6NEL2 793 aa20.91■□□□□ 0.94
SBDSP1-202ENST00000423945 GPATCH4Q5T3I0 446 aaKnown RBP20.91■□□□□ 0.94
SBDSP1-202ENST00000423945 MSL3Q8N5Y2 521 aaKnown RBP20.91■□□□□ 0.94
SBDSP1-202ENST00000423945 SENP2Q9HC62 589 aa20.91■□□□□ 0.94
SBDSP1-202ENST00000423945 COL9A3Q14050 684 aaPredicted RBP20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 GJC2Q5T442 439 aaPredicted RBP20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 LENG1Q96BZ8 264 aaPredicted RBP20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 UBAC1Q9BSL1 405 aa20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 KATNBL1Q9H079 304 aa20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 CYP39A1Q9NYL5 469 aa20.9■□□□□ 0.94
SBDSP1-202ENST00000423945 POTEB2H3BUK9 544 aa20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 EVI5O60447 810 aa20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 ANTXR2P58335 489 aa20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 CLEC4DQ8WXI8 215 aa20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 PURBQ96QR8 312 aaKnown RBP20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 DDX49Q9Y6V7 483 aaKnown RBP20.89■□□□□ 0.93
SBDSP1-202ENST00000423945 MYH6P13533 1939 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 DNM1LO00429 736 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 NFIBO00712 420 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 ADCY6O43306 1168 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 TRDNQ13061 729 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 LRRC26Q2I0M4 334 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 IFIT1BQ5T764 474 aaKnown RBP20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 ARMCX2Q7L311 632 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 CHST3Q7LGC8 479 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 MB21D2Q8IYB1 491 aaPredicted RBP20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 STAG2Q8N3U4 1231 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
SBDSP1-202ENST00000423945 WDR19Q8NEZ3 1342 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 RANBP2P49792 3224 aaKnown RBP20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 AKR1A1P14550 325 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 LRRC41Q15345 812 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 ASPRV1Q53RT3 343 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 NSMFQ6X4W1 530 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 CCDC144CPQ8IYA2 1237 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 NCOA7Q8NI08 942 aa20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 SENP6Q9GZR1 1112 aaPredicted RBP20.87■□□□□ 0.93
SBDSP1-202ENST00000423945 COLQQ9Y215 455 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms