RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 AGBL1Q96MI9 1066 aa25.24■■□□□ 1.63
SEC22C-207ENST00000423701 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
SEC22C-207ENST00000423701 PTPN22Q9Y2R2 807 aa25.24■■□□□ 1.63
SEC22C-207ENST00000423701 COPB2P35606 906 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 SLC4A3P48751 1232 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 PRMT2P55345 433 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 TOB2Q14106 344 aaPredicted RBP25.23■■□□□ 1.63
SEC22C-207ENST00000423701 PKN2Q16513 984 aaKnown RBP25.23■■□□□ 1.63
SEC22C-207ENST00000423701 SLC35G1Q2M3R5 365 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 MCOLN1Q9GZU1 580 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 DOCK3Q8IZD9 2030 aa25.23■■□□□ 1.63
SEC22C-207ENST00000423701 ZNF236Q9UL36 1845 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 ZBTB43O43298 467 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 DHX16O60231 1041 aaKnown RBP25.22■■□□□ 1.63
SEC22C-207ENST00000423701 ICAM1P05362 532 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 FLT3LGP49771 235 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 CDC37Q16543 378 aaPredicted RBP25.22■■□□□ 1.63
SEC22C-207ENST00000423701 FBXO46Q6PJ61 603 aaPredicted RBP25.22■■□□□ 1.63
SEC22C-207ENST00000423701 NBPF11Q86T75 865 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 FANCBQ8NB91 859 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 JMJD4Q9H9V9 463 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 UPF2Q9HAU5 1272 aaKnown RBP25.22■■□□□ 1.63
SEC22C-207ENST00000423701 PDRG1Q9NUG6 133 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 GJD2Q9UKL4 321 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 IVNS1ABPQ9Y6Y0 642 aa25.22■■□□□ 1.63
SEC22C-207ENST00000423701 PTPREP23469 700 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 RBM25P49756 843 aaKnown RBP25.21■■□□□ 1.63
SEC22C-207ENST00000423701 SOCS4Q8WXH5 440 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 BACH2Q9BYV9 841 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 VAT1LQ9HCJ6 419 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 CCPG1Q9ULG6 757 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 PTCH2Q9Y6C5 1203 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 GOLGA8BA8MQT2 603 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 CYTH3O43739 400 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 TAL1P17542 331 aaPredicted RBP25.21■■□□□ 1.63
SEC22C-207ENST00000423701 RCAN1P53805 252 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 GRB14Q14449 540 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 MORN1Q5T089 497 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 RIOX1Q9H6W3 641 aa25.21■■□□□ 1.63
SEC22C-207ENST00000423701 NAP1L2Q9ULW6 460 aaPredicted RBP25.21■■□□□ 1.63
SEC22C-207ENST00000423701 PLEKHA8P1O95397 391 aa25.2■■□□□ 1.62
SEC22C-207ENST00000423701 EVCP57679 992 aa25.2■■□□□ 1.62
SEC22C-207ENST00000423701 MTMR8Q96EF0 704 aa25.2■■□□□ 1.62
SEC22C-207ENST00000423701 NUDT12Q9BQG2 462 aa25.2■■□□□ 1.62
SEC22C-207ENST00000423701 HOMER2Q9NSB8 354 aa25.2■■□□□ 1.62
SEC22C-207ENST00000423701 SLC15A5A6NIM6 579 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 GOLGA8AA7E2F4 631 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 STRNO43815 780 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 ALAS1P13196 640 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 GNAQP50148 359 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 QRICH1Q2TAL8 776 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 RAET1EQ8TD07 263 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 USP6NLQ92738 828 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 KIF2CQ99661 725 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 RNF146Q9NTX7 359 aa25.19■■□□□ 1.62
SEC22C-207ENST00000423701 NID2Q14112 1375 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 FCER1AP12319 257 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 IRF5Q13568 498 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 RTN1Q16799 776 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 TMTC3Q6ZXV5 915 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 ABRAQ8N0Z2 381 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 SRBD1Q8N5C6 995 aaKnown RBP25.18■■□□□ 1.62
SEC22C-207ENST00000423701 CHST13Q8NET6 341 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 LZTS2Q9BRK4 669 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 SPZ1Q9BXG8 430 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 HPS5Q9UPZ3 1129 aa25.18■■□□□ 1.62
SEC22C-207ENST00000423701 ADORA2AP29274 412 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 METAP2P50579 478 aaKnown RBP eCLIP25.17■■□□□ 1.62
SEC22C-207ENST00000423701 TKFCQ3LXA3 575 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 CMTR1Q8N1G2 835 aaKnown RBP25.17■■□□□ 1.62
SEC22C-207ENST00000423701 TRERF1Q96PN7 1200 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 MMP19Q99542 508 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 LARP6Q9BRS8 491 aaKnown RBP25.17■■□□□ 1.62
SEC22C-207ENST00000423701 ALDH8A1Q9H2A2 487 aaPredicted RBP25.17■■□□□ 1.62
SEC22C-207ENST00000423701 RBM28Q9NW13 759 aaKnown RBP25.17■■□□□ 1.62
SEC22C-207ENST00000423701 FBXO40Q9UH90 709 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 PNMA2Q9UL42 364 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 MYH6P13533 1939 aa25.17■■□□□ 1.62
SEC22C-207ENST00000423701 ZBTB5O15062 677 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 SMARCA1P28370 1054 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 RGS2P41220 211 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 MAP2K5Q13163 448 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.16■■□□□ 1.62
SEC22C-207ENST00000423701 HOMER1Q86YM7 354 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 PIGSQ96S52 555 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 ACAD9Q9H845 621 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 FAM217BQ9NTX9 383 aaPredicted RBP25.16■■□□□ 1.62
SEC22C-207ENST00000423701 SMCHD1A6NHR9 2005 aa25.16■■□□□ 1.62
SEC22C-207ENST00000423701 CYP2B6P20813 491 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 CDC27P30260 824 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 NEK4P51957 841 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 AK2P54819 239 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 KCTD2Q14681 263 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 USH1GQ495M9 461 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 MUM1L1Q5H9M0 696 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 APBA2Q99767 749 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 PPP1R11O60927 126 aaPredicted RBP25.15■■□□□ 1.62
SEC22C-207ENST00000423701 PDIA3P30101 505 aaKnown RBP25.15■■□□□ 1.62
SEC22C-207ENST00000423701 FBXO11Q86XK2 927 aa25.15■■□□□ 1.62
SEC22C-207ENST00000423701 TNS4Q8IZW8 715 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms