RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
HDLBP-209ENST00000422933 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-209ENST00000422933 PNMA6FA0A0J9YX94 578 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 hCG_1984214I3L0E3 225 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 ZBTB5O15062 677 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CDC37Q16543 378 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 WDR78Q5VTH9 848 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CCDC174Q6PII3 467 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 ZNF713Q8N859 430 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CCDC12Q8WUD4 166 aaPredicted RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 LLPHQ9BRT6 129 aaKnown RBP11.54□□□□□ -0.56
HDLBP-209ENST00000422933 AMNQ9BXJ7 453 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CFHR5Q9BXR6 569 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 RIOX1Q9H6W3 641 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 SLC38A10Q9HBR0 1119 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 FBXO40Q9UH90 709 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CPA4Q9UI42 421 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 CCPG1Q9ULG6 757 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 NID2Q14112 1375 aa11.54□□□□□ -0.56
HDLBP-209ENST00000422933 BAZ2BQ9UIF8 2168 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ICAM1P05362 532 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 IFNAR1P17181 557 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 HOXD10P28358 340 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 MAPK4P31152 587 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ERVK-24P63145 666 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 HMGN5P82970 282 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SP3Q02447 781 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 TRIM29Q14134 588 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ME3Q16798 604 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SRBD1Q8N5C6 995 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 FAM184AQ8NB25 1140 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 PIBF1Q8WXW3 757 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SNX21Q969T3 373 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SLC26A6Q9BXS9 759 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 RNF26Q9BY78 433 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 RANBP17Q9H2T7 1088 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 MROH8Q9H579 483 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 MORF4L1Q9UBU8 362 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
HDLBP-209ENST00000422933 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
HDLBP-209ENST00000422933 COL11A1P12107 1806 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 PRPF3O43395 683 aaKnown RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 FKTNO75072 461 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 DEXIO95424 95 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 ALAS1P13196 640 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 CDC27P30260 824 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 SCRN1Q12765 414 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 C17orf99Q6UX52 265 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 MCF2L2Q86YR7 1114 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 CCDC83Q8IWF9 413 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 NECAB1Q8N987 351 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 SHCBP1Q8NEM2 672 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 CUL5Q93034 780 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 COA7Q96BR5 231 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 TMX3Q96JJ7 454 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 PIGSQ96S52 555 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 MAF1Q9H063 256 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 NCOA5Q9HCD5 579 aaKnown RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-209ENST00000422933 ABCB11O95342 1321 aa11.52□□□□□ -0.57
HDLBP-209ENST00000422933 GPR25O00155 361 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 STRNO43815 780 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-209ENST00000422933 GNRH1P01148 92 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 FCGRTP55899 365 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 KCTD2Q14681 263 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 USH1GQ495M9 461 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 RIOX2Q8IUF8 465 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms