RNA–Protein interactions for RNA: ENST00000422806.1

NKX1-1-201, Transcript of NK1 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX1-1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1-201ENST00000422806 PLXNA1Q9UIW2 1896 aa33.87■■■■□ 3.01
NKX1-1-201ENST00000422806 KDM4AO75164 1064 aa33.87■■■■□ 3.01
NKX1-1-201ENST00000422806 SYN1P17600 705 aa33.87■■■■□ 3.01
NKX1-1-201ENST00000422806 CCDC178Q5BJE1 867 aa33.87■■■■□ 3.01
NKX1-1-201ENST00000422806 CCDC174Q6PII3 467 aa33.87■■■■□ 3.01
NKX1-1-201ENST00000422806 B4E1Z4 1266 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 SEPT4O43236 478 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 MAGEA10P43363 369 aaPredicted RBP33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 SNAP25P60880 206 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 ANO1Q5XXA6 986 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 LRCH3Q96II8 777 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 AGBL1Q96MI9 1066 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 GPCPD1Q9NPB8 672 aa33.86■■■■□ 3.01
NKX1-1-201ENST00000422806 FRMPD2Q68DX3 1309 aaPredicted RBP33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 SLC16A2P36021 539 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 TTBK2Q6IQ55 1244 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 GPR153Q6NV75 609 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 KRT23Q9C075 422 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 ACAD9Q9H845 621 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 NRBP1Q9UHY1 535 aa33.85■■■■□ 3.01
NKX1-1-201ENST00000422806 ALAS1P13196 640 aa33.84■■■■□ 3.01
NKX1-1-201ENST00000422806 TKFCQ3LXA3 575 aa33.84■■■■□ 3.01
NKX1-1-201ENST00000422806 DGKHQ86XP1 1220 aa33.84■■■■□ 3.01
NKX1-1-201ENST00000422806 CNNM2Q9H8M5 875 aa33.84■■■■□ 3.01
NKX1-1-201ENST00000422806 LAMA4Q16363 1823 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 ZNF536O15090 1300 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 DNAJC25-GNG10A0A024R161 153 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 PDHBP11177 359 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 LRRC26Q2I0M4 334 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 SYDE2Q5VT97 1194 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 ARRDC4Q8NCT1 418 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 TRERF1Q96PN7 1200 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 RNF146Q9NTX7 359 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 ZSWIM5Q9P217 1185 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 CNPY2Q9Y2B0 182 aa33.83■■■■□ 3.01
NKX1-1-201ENST00000422806 MYCNP04198 464 aaPredicted RBP33.82■■■■□ 3
NKX1-1-201ENST00000422806 LRIT3Q3SXY7 679 aa33.82■■■■□ 3
NKX1-1-201ENST00000422806 BTNL9Q6UXG8 535 aa33.82■■■■□ 3
NKX1-1-201ENST00000422806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.82■■■■□ 3
NKX1-1-201ENST00000422806 TDHQ8IZJ6 230 aa33.82■■■■□ 3
NKX1-1-201ENST00000422806 MSL3Q8N5Y2 521 aaKnown RBP33.82■■■■□ 3
NKX1-1-201ENST00000422806 SMCHD1A6NHR9 2005 aa33.82■■■■□ 3
NKX1-1-201ENST00000422806 FRMPD3Q5JV73 1810 aa33.81■■■■□ 3
NKX1-1-201ENST00000422806 ZSCAN10Q96SZ4 725 aaPredicted RBP33.81■■■■□ 3
NKX1-1-201ENST00000422806 CCPG1Q9ULG6 757 aa33.81■■■■□ 3
NKX1-1-201ENST00000422806 CENPQQ7L2Z9 268 aaPredicted RBP33.8■■■■□ 3
NKX1-1-201ENST00000422806 UBE2OQ9C0C9 1292 aaKnown RBP33.8■■■■□ 3
NKX1-1-201ENST00000422806 SENP6Q9GZR1 1112 aaPredicted RBP33.8■■■■□ 3
NKX1-1-201ENST00000422806 KAT14Q9H8E8 782 aa33.8■■■■□ 3
NKX1-1-201ENST00000422806 DNM1LO00429 736 aa33.79■■■■□ 3
NKX1-1-201ENST00000422806 PTH1RQ03431 593 aa33.79■■■■□ 3
NKX1-1-201ENST00000422806 ZNF543Q08ER8 600 aa33.79■■■■□ 3
NKX1-1-201ENST00000422806 ZNF467Q7Z7K2 595 aaPredicted RBP33.79■■■■□ 3
NKX1-1-201ENST00000422806 UBAC1Q9BSL1 405 aa33.79■■■■□ 3
NKX1-1-201ENST00000422806 RANBP17Q9H2T7 1088 aaKnown RBP33.79■■■■□ 3
NKX1-1-201ENST00000422806 U3KPZ7 1027 aaPredicted RBP33.79■■■■□ 3
NKX1-1-201ENST00000422806 POTEB2H3BUK9 544 aa33.78■■■■□ 3
NKX1-1-201ENST00000422806 TAL1P17542 331 aaPredicted RBP33.78■■■■□ 3
NKX1-1-201ENST00000422806 TRDNQ13061 729 aa33.78■■■■□ 3
NKX1-1-201ENST00000422806 GJC2Q5T442 439 aaPredicted RBP33.78■■■■□ 3
NKX1-1-201ENST00000422806 PNMA1Q8ND90 353 aa33.78■■■■□ 3
NKX1-1-201ENST00000422806 SYNGAP1Q96PV0 1343 aa33.78■■■■□ 3
NKX1-1-201ENST00000422806 KBTBD13C9JR72 458 aa33.77■■■■□ 3
NKX1-1-201ENST00000422806 SGSM2O43147 1006 aa33.77■■■■□ 3
NKX1-1-201ENST00000422806 ICAM1P05362 532 aa33.77■■■■□ 3
NKX1-1-201ENST00000422806 RARBP10826 455 aa33.77■■■■□ 3
NKX1-1-201ENST00000422806 MAMDC4Q6UXC1 1216 aa33.77■■■■□ 3
NKX1-1-201ENST00000422806 A1CFQ9NQ94 594 aaKnown RBP33.77■■■■□ 3
NKX1-1-201ENST00000422806 SNHG28P0DPA3 235 aa33.76■■■□□ 2.99
NKX1-1-201ENST00000422806 GPATCH4Q5T3I0 446 aaKnown RBP33.76■■■□□ 2.99
NKX1-1-201ENST00000422806 ANKS1AQ92625 1134 aa33.76■■■□□ 2.99
NKX1-1-201ENST00000422806 ZNF865P0CJ78 1059 aaPredicted RBP33.75■■■□□ 2.99
NKX1-1-201ENST00000422806 ENAHQ8N8S7 591 aaPredicted RBP33.75■■■□□ 2.99
NKX1-1-201ENST00000422806 ZHX1Q9UKY1 873 aaPredicted RBP33.75■■■□□ 2.99
NKX1-1-201ENST00000422806 TNKSO95271 1327 aa33.75■■■□□ 2.99
NKX1-1-201ENST00000422806 SNAI1O95863 264 aaPredicted RBP33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 GOLGA8HP0CJ92 632 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 AKR1A1P14550 325 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 CNTN2Q02246 1040 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 MUM1L1Q5H9M0 696 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 KIAA1211Q6ZU35 1233 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 XPNPEP3Q9NQH7 507 aa33.74■■■□□ 2.99
NKX1-1-201ENST00000422806 NSMFQ6X4W1 530 aa33.73■■■□□ 2.99
NKX1-1-201ENST00000422806 CDKN2AIPQ9NXV6 580 aaPredicted RBP33.73■■■□□ 2.99
NKX1-1-201ENST00000422806 PNMA2Q9UL42 364 aa33.73■■■□□ 2.99
NKX1-1-201ENST00000422806 FAM184BQ9ULE4 1060 aa33.73■■■□□ 2.99
NKX1-1-201ENST00000422806 CYP21A2P08686 494 aa33.72■■■□□ 2.99
NKX1-1-201ENST00000422806 IFIT1BQ5T764 474 aaKnown RBP33.72■■■□□ 2.99
NKX1-1-201ENST00000422806 FAM133AQ8N9E0 248 aa33.72■■■□□ 2.99
NKX1-1-201ENST00000422806 ATN1P54259 1190 aaPredicted RBP33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 ACVR2BQ13705 512 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 LRRC41Q15345 812 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 ARMCX2Q7L311 632 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 FGD4Q96M96 766 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 UBA5Q9GZZ9 404 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 ABHD16BQ9H3Z7 469 aa33.71■■■□□ 2.99
NKX1-1-201ENST00000422806 RNF180Q86T96 592 aa33.7■■■□□ 2.99
NKX1-1-201ENST00000422806 CCDC144CPQ8IYA2 1237 aa33.7■■■□□ 2.99
NKX1-1-201ENST00000422806 CYP39A1Q9NYL5 469 aa33.7■■■□□ 2.99
NKX1-1-201ENST00000422806 MCM3APO60318 1980 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms