RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 PCDHA6Q9UN73 950 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 PCDHA8Q9Y5H6 950 aa26.17■■□□□ 1.78
LSM8-203ENST00000422760 SPDYE2BA6NHP3 402 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 SPDYE6P0CI01 402 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 TGFB2P61812 414 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 MDM2Q00987 491 aaPredicted RBP26.16■■□□□ 1.78
LSM8-203ENST00000422760 ATP2B2Q01814 1243 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 PTGDRQ13258 359 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 CERKLQ49MI3 558 aaPredicted RBP26.16■■□□□ 1.78
LSM8-203ENST00000422760 CCDC12Q8WUD4 166 aaPredicted RBP26.16■■□□□ 1.78
LSM8-203ENST00000422760 ZMYND12Q9H0C1 365 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 VPS33BQ9H267 617 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 ATF5Q9Y2D1 282 aaPredicted RBP26.16■■□□□ 1.78
LSM8-203ENST00000422760 UBASH3AP57075 661 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 ZNF543Q08ER8 600 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 SHROOM1Q2M3G4 852 aaPredicted RBP26.16■■□□□ 1.78
LSM8-203ENST00000422760 PPP4R3BQ5MIZ7 849 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 TATDN1Q6P1N9 297 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 USP49Q70CQ1 688 aa26.16■■□□□ 1.78
LSM8-203ENST00000422760 FER1L6Q2WGJ9 1857 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 CCDC194A0A1B0GVG4 234 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 NCBP1Q09161 790 aaKnown RBP26.15■■□□□ 1.78
LSM8-203ENST00000422760 PNOCQ13519 176 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 POSTNQ15063 836 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 ARMCX5Q6P1M9 558 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 FOXP4Q8IVH2 680 aaPredicted RBP26.15■■□□□ 1.78
LSM8-203ENST00000422760 HSD3B7Q9H2F3 369 aa26.15■■□□□ 1.78
LSM8-203ENST00000422760 POLR2DO15514 142 aaKnown RBP26.14■■□□□ 1.78
LSM8-203ENST00000422760 SERPINC1P01008 464 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 POLD1P28340 1107 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 LMOD1P29536 600 aaPredicted RBP26.14■■□□□ 1.78
LSM8-203ENST00000422760 MCM7P33993 719 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 NIM1KQ8IY84 436 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 ERO1AQ96HE7 468 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 MTFR1LQ9H019 292 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 GPCPD1Q9NPB8 672 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 ZBTB12Q9Y330 459 aaPredicted RBP26.14■■□□□ 1.78
LSM8-203ENST00000422760 PCDHA5Q9Y5H7 936 aa26.14■■□□□ 1.78
LSM8-203ENST00000422760 VSTM4Q8IW00 320 aa26.14■■□□□ 1.77
LSM8-203ENST00000422760 HDAC9Q9UKV0 1011 aa26.14■■□□□ 1.77
LSM8-203ENST00000422760 ZNRF3Q9ULT6 936 aa26.14■■□□□ 1.77
LSM8-203ENST00000422760 ARFGEF1Q9Y6D6 1849 aa26.13■■□□□ 1.77
LSM8-203ENST00000422760 SARSP49591 514 aaKnown RBP26.13■■□□□ 1.77
LSM8-203ENST00000422760 ENOX1Q8TC92 643 aaKnown RBP26.13■■□□□ 1.77
LSM8-203ENST00000422760 TSC1Q92574 1164 aa26.13■■□□□ 1.77
LSM8-203ENST00000422760 TMOD2Q9NZR1 351 aa26.13■■□□□ 1.77
LSM8-203ENST00000422760 OGFOD1Q8N543 542 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 PDILTQ8N807 584 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 SMARCE1Q969G3 411 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 PYM1Q9BRP8 204 aaKnown RBP26.12■■□□□ 1.77
LSM8-203ENST00000422760 VWA3AA6NCI4 1184 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 hCG_1984214I3L0E3 225 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 CCDC96Q2M329 555 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 DALRD3Q5D0E6 543 aaKnown RBP26.12■■□□□ 1.77
LSM8-203ENST00000422760 GPATCH4Q5T3I0 446 aaKnown RBP26.12■■□□□ 1.77
LSM8-203ENST00000422760 ZNF713Q8N859 430 aaPredicted RBP26.12■■□□□ 1.77
LSM8-203ENST00000422760 SYMPKQ92797 1274 aaKnown RBP26.12■■□□□ 1.77
LSM8-203ENST00000422760 EPSTI1Q96J88 318 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 CSRNP1Q96S65 589 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 KANSL2Q9H9L4 492 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 C6orf50Q9HD87 102 aa26.12■■□□□ 1.77
LSM8-203ENST00000422760 CLRN2A0PK11 232 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 SMCO2A6NFE2 343 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 USP27XA6NNY8 438 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 FOXN1O15353 648 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 EEF2P13639 858 aaKnown RBP26.11■■□□□ 1.77
LSM8-203ENST00000422760 ERCC5P28715 1186 aaPredicted RBP26.11■■□□□ 1.77
LSM8-203ENST00000422760 DLGAP5Q15398 846 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 E4F1Q66K89 784 aaPredicted RBP26.11■■□□□ 1.77
LSM8-203ENST00000422760 TMEM179Q6ZVK1 233 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 SERTAD1Q9UHV2 236 aa26.11■■□□□ 1.77
LSM8-203ENST00000422760 GOLGA6L9A6NEM1 432 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 GDF11O95390 407 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 GNA11P29992 359 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 SEPT2Q15019 361 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 INF2Q27J81 1249 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 SPATA20Q8TB22 786 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 PPP1R13BQ96KQ4 1090 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 TMX1Q9H3N1 280 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 NYAP2Q9P242 653 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 ESYT2A0FGR8 921 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 TCP10L2B9ZVM9 353 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 ACTN4O43707 911 aaKnown RBP26.1■■□□□ 1.77
LSM8-203ENST00000422760 MORC3Q14149 939 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 L2HGDHQ9H9P8 463 aa26.1■■□□□ 1.77
LSM8-203ENST00000422760 A0A087X0B3 334 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 SLU7O95391 586 aaKnown RBP26.09■■□□□ 1.77
LSM8-203ENST00000422760 ICA1Q05084 483 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 ABCB5Q2M3G0 1257 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 TTBK2Q6IQ55 1244 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 KCTD1Q719H9 257 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 ADGRF4Q8IZF3 695 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 ZNF592Q92610 1267 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 MKL1Q969V6 931 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 TAOK3Q9H2K8 898 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 JMJD4Q9H9V9 463 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 ZNF70Q9UC06 446 aaPredicted RBP26.09■■□□□ 1.77
LSM8-203ENST00000422760 MAN1B1Q9UKM7 699 aa26.09■■□□□ 1.77
LSM8-203ENST00000422760 ZSCAN12O43309 604 aa26.08■■□□□ 1.77
LSM8-203ENST00000422760 ARL6IP4Q66PJ3 421 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms