RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CAPN11Q9UMQ6 739 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 NFU1Q9UMS0 254 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 ANKRD18BA2A2Z9 1011 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 GOLGA8KD6RF30 607 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 ENOX2Q16206 610 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 IL17AQ16552 155 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 CREG2Q8IUH2 290 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 RNPC3Q96LT9 517 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 PPANQ9NQ55 473 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 LRP2BPQ9P2M1 347 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 RDXP35241 583 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 C8orf74Q6P047 294 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 PDXDC2PQ6P474 469 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 AMOTL1Q8IY63 956 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 DNAJC7Q99615 494 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 IFIH1Q9BYX4 1025 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 H7C1D1 291 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 SWT1Q5T5J6 900 aaKnown RBP18.55■□□□□ 0.56
PKP4-204ENST00000421462 CABS1Q96KC9 395 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
PKP4-204ENST00000421462 AKR1B10O60218 316 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 FAM153BP0C7A2 387 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 PTPROQ16827 1216 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 FAM153CQ494X1 144 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 FAM153AQ9UHL3 310 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 SNX12Q9UMY4 172 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 SOS2Q07890 1332 aaPredicted RBP18.54■□□□□ 0.56
PKP4-204ENST00000421462 ZNF263O14978 683 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 TACC1O75410 805 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 RASGRF1Q13972 1273 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 CCDC178Q5BJE1 867 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 CFAP58Q5T655 872 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 IFIT1BQ5T764 474 aaKnown RBP18.54■□□□□ 0.56
PKP4-204ENST00000421462 TMC4Q7Z404 712 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 MAATS1Q7Z4T9 603 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 HPS3Q969F9 1004 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 PHF20Q9BVI0 1012 aa18.54■□□□□ 0.56
PKP4-204ENST00000421462 SIPA1L3O60292 1781 aaPredicted RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 PDE8BO95263 885 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 CARSP49589 748 aaKnown RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 PROCA1Q8NCQ7 364 aaPredicted RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 GIMAP7Q8NHV1 300 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 RBM12Q9NTZ6 932 aaKnown RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 EXOC1Q9NV70 894 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 RNF26Q9BY78 433 aaPredicted RBP18.53■□□□□ 0.56
PKP4-204ENST00000421462 BCCIPQ9P287 314 aaKnown RBP eCLIP18.53■□□□□ 0.56
PKP4-204ENST00000421462 WDR17Q8IZU2 1322 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 E7EVH7 732 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 PAFAH1B1P43034 410 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 GUCY2DQ02846 1103 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 TRADDQ15628 312 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 OSBPL9Q96SU4 736 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 MMRN2Q9H8L6 949 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 EPB41L5Q9HCM4 733 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 RMND1Q9NWS8 449 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 STIM2Q9P246 746 aa18.53■□□□□ 0.56
PKP4-204ENST00000421462 NMT2O60551 498 aa18.52■□□□□ 0.56
PKP4-204ENST00000421462 USO1O60763 962 aaKnown RBP18.52■□□□□ 0.56
PKP4-204ENST00000421462 HLFQ16534 295 aa18.52■□□□□ 0.56
PKP4-204ENST00000421462 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
PKP4-204ENST00000421462 SH3GL2Q99962 352 aa18.52■□□□□ 0.56
PKP4-204ENST00000421462 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
PKP4-204ENST00000421462 FRMD3A2A2Y4 597 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 PSMA7O14818 248 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 MEFVO15553 781 aaPredicted RBP18.52■□□□□ 0.55
PKP4-204ENST00000421462 EPHB4P54760 987 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 HDLBPQ00341 1268 aaKnown RBP18.52■□□□□ 0.55
PKP4-204ENST00000421462 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 SUFUQ9UMX1 484 aa18.52■□□□□ 0.55
PKP4-204ENST00000421462 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 CCDC172P0C7W6 258 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 LSP1P33241 339 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 DNM2P50570 870 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 BCAMP50895 628 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 VAV2P52735 878 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 ATP2C1P98194 919 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 ADSSL1Q8N142 457 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 NAA35Q5VZE5 725 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 HAUS3Q68CZ6 603 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 TMTC2Q8N394 836 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 BANK1Q8NDB2 785 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 CNPY4Q8N129 248 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
PKP4-204ENST00000421462 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
PKP4-204ENST00000421462 PCDHA13Q9Y5I0 950 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms