RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ADCY6O43306 1168 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 SNX17Q15036 470 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 AKNAD1Q5T1N1 836 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 TTBK2Q6IQ55 1244 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 CWC27Q6UX04 472 aaKnown RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ARRDC4Q8NCT1 418 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-206ENST00000420121 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 KATNBL1Q9H079 304 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 PRR12Q9ULL5 1215 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ASTN1O14525 1302 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 NEDD4P46934 1319 aa13.05□□□□□ -0.32
SSBP3-206ENST00000420121 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 SNAP25P60880 206 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-206ENST00000420121 CNTN2Q02246 1040 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
SSBP3-206ENST00000420121 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
SSBP3-206ENST00000420121 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
SSBP3-206ENST00000420121 MYH6P13533 1939 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
SSBP3-206ENST00000420121 PGK1P00558 417 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
SSBP3-206ENST00000420121 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
SSBP3-206ENST00000420121 AKR1A1P14550 325 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 RTP1P59025 263 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 ANKRD35Q8N283 1001 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
SSBP3-206ENST00000420121 ACAD9Q9H845 621 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 RNF146Q9NTX7 359 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
SSBP3-206ENST00000420121 CTDP1Q9Y5B0 961 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-206ENST00000420121 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 KBTBD13C9JR72 458 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 RARBP10826 455 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 PDHBP11177 359 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 SLC16A2P36021 539 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 CCSAPQ6IQ19 270 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 CCDC174Q6PII3 467 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 CNPY2Q9Y2B0 182 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
SSBP3-206ENST00000420121 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.33
SSBP3-206ENST00000420121 HIP1O00291 1037 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 ALAS1P13196 640 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-206ENST00000420121 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 TKFCQ3LXA3 575 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 C1orf53Q5VUE5 145 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 FERMT2Q96AC1 680 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 TTC14Q96N46 770 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 ZKSCAN3Q9BRR0 538 aa13.01□□□□□ -0.33
SSBP3-206ENST00000420121 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-206ENST00000420121 A0A1W2PQ45 241 aaPredicted RBP13□□□□□ -0.33
SSBP3-206ENST00000420121 A0A1W2PQY0 241 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 MYADML2A6NDP7 307 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 POTEB2H3BUK9 544 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 ZNF213O14771 459 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 CTAGE5O15320 804 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 ICAM1P05362 532 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
SSBP3-206ENST00000420121 TRIM60Q495X7 471 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms