RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUP50-205ENST00000419387 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 CHST13Q8NET6 341 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
NUP50-205ENST00000419387 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
NUP50-205ENST00000419387 STX8Q9UNK0 236 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 CNPY2Q9Y2B0 182 aa11.17□□□□□ -0.62
NUP50-205ENST00000419387 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 SOX1O00570 391 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 NMT2O60551 498 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 AKR1A1P14550 325 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 ADCYAP1R1P41586 468 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 NOVP48745 357 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 NUCB1Q02818 461 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 RNF180Q86T96 592 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 ZNF589Q86UQ0 364 aaPredicted RBP11.16□□□□□ -0.62
NUP50-205ENST00000419387 PLEKHM2Q8IWE5 1019 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 CHMP4CQ96CF2 233 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 TOMM22Q9NS69 142 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 FAM184BQ9ULE4 1060 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
NUP50-205ENST00000419387 PGK1P00558 417 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 SDSP20132 328 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 TKFCQ3LXA3 575 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 C1orf53Q5VUE5 145 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 AGBL1Q96MI9 1066 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
NUP50-205ENST00000419387 TCP11L1Q9NUJ3 509 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 PRKAG2Q9UGJ0 569 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 PHF24Q9UPV7 400 aa11.15□□□□□ -0.62
NUP50-205ENST00000419387 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 ZNF536O15090 1300 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 ZMYM6O95789 1325 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 RANBP2P49792 3224 aaKnown RBP11.14□□□□□ -0.63
NUP50-205ENST00000419387 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
NUP50-205ENST00000419387 SNX17Q15036 470 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 RRP12Q5JTH9 1297 aaKnown RBP11.14□□□□□ -0.63
NUP50-205ENST00000419387 DCAF4Q8WV16 495 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
NUP50-205ENST00000419387 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
NUP50-205ENST00000419387 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 PLXNA1Q9UIW2 1896 aa11.14□□□□□ -0.63
NUP50-205ENST00000419387 ADAMTS4O75173 837 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
NUP50-205ENST00000419387 PCP11498 1178 aaKnown RBP11.13□□□□□ -0.63
NUP50-205ENST00000419387 ALAS1P13196 640 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 HAND2P61296 217 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 CNTN2Q02246 1040 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 TRIM60Q495X7 471 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 GPR153Q6NV75 609 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 LENG1Q96BZ8 264 aaPredicted RBP11.13□□□□□ -0.63
NUP50-205ENST00000419387 FGD4Q96M96 766 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 TMEM47Q9BQJ4 181 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
NUP50-205ENST00000419387 ABHD16BQ9H3Z7 469 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
NUP50-205ENST00000419387 RNF146Q9NTX7 359 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
NUP50-205ENST00000419387 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
NUP50-205ENST00000419387 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 DUSP11O75319 330 aaKnown RBP11.12□□□□□ -0.63
NUP50-205ENST00000419387 SNAP25P60880 206 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 BTNL9Q6UXG8 535 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 ARMCX2Q7L311 632 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 FAM133AQ8N9E0 248 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
NUP50-205ENST00000419387 TTC14Q96N46 770 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms