RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 ALAS1P13196 640 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 SLC16A2P36021 539 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 SYDE2Q5VT97 1194 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 BTNL9Q6UXG8 535 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 ARRDC4Q8NCT1 418 aa17.99■□□□□ 0.47
NUP50-204ENST00000417702 ZSCAN10Q96SZ4 725 aaPredicted RBP17.99■□□□□ 0.47
NUP50-204ENST00000417702 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
NUP50-204ENST00000417702 ZNF536O15090 1300 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 NEFLP07196 543 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 SNAP25P60880 206 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 TRDNQ13061 729 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
NUP50-204ENST00000417702 TRERF1Q96PN7 1200 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 UBAC1Q9BSL1 405 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
NUP50-204ENST00000417702 SGSM2O43147 1006 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 ICAM1P05362 532 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 COL6A1P12109 1028 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 ANO1Q5XXA6 986 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
NUP50-204ENST00000417702 PNMA2Q9UL42 364 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 LAMA4Q16363 1823 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 PFASO15067 1338 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
NUP50-204ENST00000417702 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 DNM1LO00429 736 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
NUP50-204ENST00000417702 SNHG28P0DPA3 235 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 RARBP10826 455 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 PTH1RQ03431 593 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
NUP50-204ENST00000417702 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
NUP50-204ENST00000417702 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
NUP50-204ENST00000417702 TNKSO95271 1327 aa17.96■□□□□ 0.46
NUP50-204ENST00000417702 PLXNA1Q9UIW2 1896 aa17.95■□□□□ 0.46
NUP50-204ENST00000417702 KBTBD13C9JR72 458 aa17.95■□□□□ 0.46
NUP50-204ENST00000417702 AKR1A1P14550 325 aa17.95■□□□□ 0.46
NUP50-204ENST00000417702 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
NUP50-204ENST00000417702 C7orf61Q8IZ16 206 aa17.95■□□□□ 0.46
NUP50-204ENST00000417702 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
NUP50-204ENST00000417702 SENP6Q9GZR1 1112 aaPredicted RBP17.95■□□□□ 0.46
NUP50-204ENST00000417702 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 CYP21A2P08686 494 aa17.94■□□□□ 0.46
NUP50-204ENST00000417702 ZNF865P0CJ78 1059 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 GJC2Q5T442 439 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
NUP50-204ENST00000417702 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 ZHX1Q9UKY1 873 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
NUP50-204ENST00000417702 COLQQ9Y215 455 aaPredicted RBP17.94■□□□□ 0.46
NUP50-204ENST00000417702 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
NUP50-204ENST00000417702 GOLGA8HP0CJ92 632 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
NUP50-204ENST00000417702 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 RALYLQ86SE5 291 aaKnown RBP17.93■□□□□ 0.46
NUP50-204ENST00000417702 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
NUP50-204ENST00000417702 ASB14A6NK59 587 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
NUP50-204ENST00000417702 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 LRRC41Q15345 812 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 ASPRV1Q53RT3 343 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 BMP2KLQ5H9B9 411 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 RNF180Q86T96 592 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 MAP4K1Q92918 833 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 FGD4Q96M96 766 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 TRIOBPQ9H2D6 2365 aa17.92■□□□□ 0.46
NUP50-204ENST00000417702 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 ERICH2A1L162 156 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 CYB5R4Q7L1T6 521 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
NUP50-204ENST00000417702 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
NUP50-204ENST00000417702 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
NUP50-204ENST00000417702 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
NUP50-204ENST00000417702 E7EWF7 191 aa17.9■□□□□ 0.46
NUP50-204ENST00000417702 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
NUP50-204ENST00000417702 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
NUP50-204ENST00000417702 PGK1P00558 417 aa17.9■□□□□ 0.46
NUP50-204ENST00000417702 ATN1P54259 1190 aaPredicted RBP17.9■□□□□ 0.46
NUP50-204ENST00000417702 SART3Q15020 963 aaKnown RBP17.9■□□□□ 0.46
NUP50-204ENST00000417702 SEC23AQ15436 765 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms