RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 STK17AQ9UEE5 414 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 IL16Q14005 1332 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 ERC2O15083 957 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 ERCC3P19447 782 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 CYP2C18P33260 490 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 CCNA1P78396 465 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 ANKRD33Q7Z3H0 272 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 RPAP3Q9H6T3 665 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 HERC5Q9UII4 1024 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 MTCH2Q9Y6C9 303 aa10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-206ENST00000416651 FLT1P17948 1338 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 ADCY6O43306 1168 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 ADAMTS4O75173 837 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 PGK2P07205 417 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 DYNLL1P63167 89 aaKnown RBP10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 NHLH1Q02575 133 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 OTOP2Q7RTS6 562 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 ZNF236Q9UL36 1845 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 TRANK1O15050 2925 aa10.69□□□□□ -0.7
NIF3L1-206ENST00000416651 MYO5AQ9Y4I1 1855 aaKnown RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 A0A1W2PRG0 241 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 ZNF865P0CJ78 1059 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 PTGS1P23219 599 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 ACLYP53396 1101 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 CCSAPQ6IQ19 270 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 LBX2Q6XYB7 198 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 ZGPATQ8N5A5 531 aaKnown RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 GTF3C2Q8WUA4 911 aaPredicted RBP10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 SLC28A3Q9HAS3 691 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 MSRAQ9UJ68 235 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 BRWD1Q9NSI6 2320 aa10.68□□□□□ -0.7
NIF3L1-206ENST00000416651 WDFY4Q6ZS81 3184 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 DCDC2CA8MYV0 355 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 WIPF1O43516 503 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 CDK7P50613 346 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 TFCP2Q12800 502 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 PPIGQ13427 754 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■■□ 25.5
NIF3L1-206ENST00000416651 RAB3GAP1Q15042 981 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 KCNA10Q16322 511 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 GPIHBP1Q8IV16 184 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 CRACR2BQ8N4Y2 399 aaPredicted RBP10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 FEZ1Q99689 392 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 SPATC1LQ9H0A9 340 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 STARD7Q9NQZ5 370 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
NIF3L1-206ENST00000416651 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 A0A1B0GUL7 405 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 APBB1O00213 710 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 CIAO1O76071 339 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 RARBP10826 455 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 MCAMP43121 646 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 CCL23P55773 120 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 INSM1Q01101 510 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 RAB30Q15771 203 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 SPTY2D1Q68D10 685 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 UIMC1Q96RL1 719 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 A0A0G2JMZ2 1700 aa10.66□□□□□ -0.7
NIF3L1-206ENST00000416651 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 PDS5AQ29RF7 1337 aaKnown RBP10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 PLS1Q14651 629 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 RNF180Q86T96 592 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 CLEC10AQ8IUN9 316 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 FOXP4Q8IVH2 680 aaPredicted RBP10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 RDH13Q8NBN7 331 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 ATG4CQ96DT6 458 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 KIAA1683Q9H0B3 1180 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 IL23AQ9NPF7 189 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 CACNA1AO00555 2505 aa10.65□□□□□ -0.7
NIF3L1-206ENST00000416651 TTC24A2A3L6 582 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 FGBP02675 491 aa10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 LDHCP07864 332 aa10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 SEPT2Q15019 361 aa10.64□□□□□ -0.71
NIF3L1-206ENST00000416651 TATDN1Q6P1N9 297 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms