RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 PATL2C9JE40 543 aaKnown RBP18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 ERC2O15083 957 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 TIMP1P01033 207 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 STAT2P52630 851 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 TSHZ3Q63HK5 1081 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 ARMCX2Q7L311 632 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 IFNL3Q8IZI9 196 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 TMEM199Q8N511 208 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 GMCL1P1Q8NEA9 526 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 KLHDC9Q8NEP7 349 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 CHURC1Q8WUH1 139 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 FSD1Q9BTV5 496 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 ACAD9Q9H845 621 aa18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
SBDSP1-201ENST00000415772 DNAJB2P25686 324 aa18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 EPHB4P54760 987 aa18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 MKL1Q969V6 931 aa18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 GREB1LQ9C091 1923 aaPredicted RBP18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
SBDSP1-201ENST00000415772 IGKV6D-41A0A0C4DH26 115 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 M0R2C6 588 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 CST5P28325 142 aaPredicted RBP18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 SLC1A4P43007 532 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 TFAP4Q01664 338 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 MFSD5Q6N075 450 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 CCDC144CPQ8IYA2 1237 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 PPP1R12CQ9BZL4 782 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 AP5M1Q9H0R1 490 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 MTIF3Q9H2K0 278 aaKnown RBP18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
SBDSP1-201ENST00000415772 MYADML2A6NDP7 307 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 ASB14A6NK59 587 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 TSPY2A6NKD2 308 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 ARVCFO00192 962 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 GJA9P57773 515 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 TNFAIP2Q03169 654 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 NEDD1Q8NHV4 660 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 TIFAQ96CG3 184 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 GAS2L1Q99501 681 aaPredicted RBP18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 STX8Q9UNK0 236 aa18.48■□□□□ 0.55
SBDSP1-201ENST00000415772 ZEB2O60315 1214 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 ALAS1P13196 640 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 TKFCQ3LXA3 575 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 ZNF576Q9H609 170 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 TBX21Q9UL17 535 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 MTMR7Q9Y216 660 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
SBDSP1-201ENST00000415772 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 PPARAQ07869 468 aa18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 CCSAPQ6IQ19 270 aaPredicted RBP18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 STAG1Q8WVM7 1258 aa18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 TRERF1Q96PN7 1200 aa18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
SBDSP1-201ENST00000415772 PLIN4Q96Q06 1357 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 CABYRO75952 493 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 CSF2RAP15509 400 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 MCCP23508 829 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 IRX5P78411 483 aaPredicted RBP18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 BEX3Q00994 111 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 GMCL1Q96IK5 515 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 MSRAQ9UJ68 235 aa18.45■□□□□ 0.54
SBDSP1-201ENST00000415772 CDK7P50613 346 aa18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 TLK2Q86UE8 772 aa18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 PPM1EQ8WY54 764 aa18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
SBDSP1-201ENST00000415772 ADCY6O43306 1168 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 ACRP10323 421 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 TMEM240Q5SV17 173 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 CXCL17Q6UXB2 119 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 NSMFQ6X4W1 530 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 FAM126BQ8IXS8 530 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 FAM133AQ8N9E0 248 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 HIPK3Q9H422 1215 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
SBDSP1-201ENST00000415772 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 DYNC1LI2O43237 492 aaPredicted RBP18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 CYP2C18P33260 490 aa18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 RAB30Q15771 203 aa18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 FSCN1Q16658 493 aaKnown RBP18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms