RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CEP290O15078 2479 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 CYBAP13498 195 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 SNAP25P60880 206 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
RFFL-204ENST00000414419 LHX8Q68G74 356 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
RFFL-204ENST00000414419 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 C11orf49Q9H6J7 331 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
RFFL-204ENST00000414419 TNKSO95271 1327 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 ERICH2A1L162 156 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 SEPT4O43236 478 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 EVI5O60447 810 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 CYP21A2P08686 494 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
RFFL-204ENST00000414419 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
RFFL-204ENST00000414419 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
RFFL-204ENST00000414419 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
RFFL-204ENST00000414419 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 ZNF536O15090 1300 aa13.13□□□□□ -0.31
RFFL-204ENST00000414419 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 IGHA2P01877 340 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
RFFL-204ENST00000414419 ICAM1P05362 532 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
RFFL-204ENST00000414419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
RFFL-204ENST00000414419 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 TRPV1Q8NER1 839 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
RFFL-204ENST00000414419 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
RFFL-204ENST00000414419 PFASO15067 1338 aa13.12□□□□□ -0.31
RFFL-204ENST00000414419 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 E7EWF7 191 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 DHX16O60231 1041 aaKnown RBP13.11□□□□□ -0.31
RFFL-204ENST00000414419 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
RFFL-204ENST00000414419 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
RFFL-204ENST00000414419 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
RFFL-204ENST00000414419 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
RFFL-204ENST00000414419 ALPK3Q96L96 1907 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 H0YGN5 161 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
RFFL-204ENST00000414419 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
RFFL-204ENST00000414419 RARBP10826 455 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 AKR1A1P14550 325 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
RFFL-204ENST00000414419 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
RFFL-204ENST00000414419 ASB14A6NK59 587 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 DNM1LO00429 736 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
RFFL-204ENST00000414419 WTAPQ15007 396 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 SEC23AQ15436 765 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 GJC2Q5T442 439 aaPredicted RBP13.09□□□□□ -0.31
RFFL-204ENST00000414419 SENP6Q9GZR1 1112 aaPredicted RBP13.09□□□□□ -0.31
RFFL-204ENST00000414419 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
RFFL-204ENST00000414419 ABHD16BQ9H3Z7 469 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
RFFL-204ENST00000414419 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
RFFL-204ENST00000414419 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 CDC45O75419 566 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
RFFL-204ENST00000414419 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
RFFL-204ENST00000414419 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.32
RFFL-204ENST00000414419 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 CHST3Q7LGC8 479 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 VAT1LQ9HCJ6 419 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 XPNPEP3Q9NQH7 507 aa13.08□□□□□ -0.32
RFFL-204ENST00000414419 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms