RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 TRIM47Q96LD4 638 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 UBA5Q9GZZ9 404 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 MAF1Q9H063 256 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 PORCNQ9H237 461 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 JMJD4Q9H9V9 463 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 EFCC1Q9HA90 598 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 ZNFX1Q9P2E3 1918 aaKnown RBP21.09■□□□□ 0.97
PAX3-208ENST00000409828 SMCHD1A6NHR9 2005 aa21.09■□□□□ 0.97
PAX3-208ENST00000409828 ZNF236Q9UL36 1845 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 CTGFP29279 349 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 PDIA3P30101 505 aaKnown RBP21.08■□□□□ 0.97
PAX3-208ENST00000409828 PKN2Q16513 984 aaKnown RBP21.08■□□□□ 0.97
PAX3-208ENST00000409828 RTN1Q16799 776 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 SNRNP48Q6IEG0 339 aaKnown RBP21.08■□□□□ 0.97
PAX3-208ENST00000409828 CTU1Q7Z7A3 348 aaKnown RBP21.08■□□□□ 0.97
PAX3-208ENST00000409828 ABRAQ8N0Z2 381 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 CHST13Q8NET6 341 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 COA7Q96BR5 231 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 FBXO40Q9UH90 709 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 HPS5Q9UPZ3 1129 aa21.08■□□□□ 0.97
PAX3-208ENST00000409828 ZSWIM8A7E2V4 1837 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 PLXNB2O15031 1838 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 GOLGA8AA7E2F4 631 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 GOLGA8BA8MQT2 603 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 TNPO2O14787 897 aaKnown RBP21.07■□□□□ 0.96
PAX3-208ENST00000409828 PEX10O60683 326 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 FMNL1O95466 1100 aaPredicted RBP21.07■□□□□ 0.96
PAX3-208ENST00000409828 ERCC3P19447 782 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 METAP2P50579 478 aaKnown RBP eCLIP21.07■□□□□ 0.96
PAX3-208ENST00000409828 PLS1Q14651 629 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 TMTC3Q6ZXV5 915 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 PLEKHH3Q7Z736 793 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 CPXCR1Q8N123 301 aa21.07■□□□□ 0.96
PAX3-208ENST00000409828 RAVER2Q9HCJ3 691 aaKnown RBP21.07■□□□□ 0.96
PAX3-208ENST00000409828 ZBTB5O15062 677 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 CYTH3O43739 400 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 RXRAP19793 462 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 AK2P54819 239 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 CAP1Q01518 475 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 CDC37Q16543 378 aaPredicted RBP21.06■□□□□ 0.96
PAX3-208ENST00000409828 OTOP1Q7RTM1 612 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 GPR142Q7Z601 462 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 SOCS4Q8WXH5 440 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 ARHGAP39Q9C0H5 1083 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 CPVLQ9H3G5 476 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 FAM217BQ9NTX9 383 aaPredicted RBP21.06■□□□□ 0.96
PAX3-208ENST00000409828 SRRDQ9UH36 339 aa21.06■□□□□ 0.96
PAX3-208ENST00000409828 SLC15A5A6NIM6 579 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 DHX16O60231 1041 aaKnown RBP21.05■□□□□ 0.96
PAX3-208ENST00000409828 PTPREP23469 700 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 SLC35G1Q2M3R5 365 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 NBPF11Q86T75 865 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 SRBD1Q8N5C6 995 aaKnown RBP21.05■□□□□ 0.96
PAX3-208ENST00000409828 GJD2Q9UKL4 321 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 CCPG1Q9ULG6 757 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 IVNS1ABPQ9Y6Y0 642 aa21.05■□□□□ 0.96
PAX3-208ENST00000409828 PNMA6FA0A0J9YX94 578 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 FUT2Q10981 343 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 IRF5Q13568 498 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 GRB14Q14449 540 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 QRICH1Q2TAL8 776 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 MORN1Q5T089 497 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 CCDC174Q6PII3 467 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 CCDC144CPQ8IYA2 1237 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 AGBL1Q96MI9 1066 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 AMNQ9BXJ7 453 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 RBM27Q9P2N5 1060 aaKnown RBP21.04■□□□□ 0.96
PAX3-208ENST00000409828 RIPK3Q9Y572 518 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 TRIM17Q9Y577 477 aa21.04■□□□□ 0.96
PAX3-208ENST00000409828 PLEKHA8P1O95397 391 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 FCER1AP12319 257 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 CDC27P30260 824 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 FBXO11Q86XK2 927 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 USP6NLQ92738 828 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 RRP36Q96EU6 259 aaKnown RBP21.03■□□□□ 0.96
PAX3-208ENST00000409828 NUDT12Q9BQG2 462 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 ACAD9Q9H845 621 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 CWC22Q9HCG8 908 aaKnown RBP21.03■□□□□ 0.96
PAX3-208ENST00000409828 VAT1LQ9HCJ6 419 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 TPCN1Q9ULQ1 816 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 NAP1L2Q9ULW6 460 aaPredicted RBP21.03■□□□□ 0.96
PAX3-208ENST00000409828 ABCB11O95342 1321 aa21.03■□□□□ 0.96
PAX3-208ENST00000409828 ST18O60284 1047 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 PFKFB2O60825 505 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 HOXC6P09630 235 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 XRCC5P13010 732 aaKnown RBP21.02■□□□□ 0.96
PAX3-208ENST00000409828 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
PAX3-208ENST00000409828 NTRK3Q16288 839 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 RAB11FIP4Q86YS3 637 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 RGS22Q8NE09 1264 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 TRERF1Q96PN7 1200 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 PIGSQ96S52 555 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 RNF146Q9NTX7 359 aa21.02■□□□□ 0.96
PAX3-208ENST00000409828 CNTNAP5Q8WYK1 1306 aa21.02■□□□□ 0.95
PAX3-208ENST00000409828 ALAS1P13196 640 aa21.01■□□□□ 0.95
PAX3-208ENST00000409828 IFNAR1P17181 557 aa21.01■□□□□ 0.95
PAX3-208ENST00000409828 SNAP25P60880 206 aa21.01■□□□□ 0.95
PAX3-208ENST00000409828 MAP2K5Q13163 448 aa21.01■□□□□ 0.95
PAX3-208ENST00000409828 KCTD2Q14681 263 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms